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ate1 arginine-tRNA--protein transferase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542941, updated on 18-Sep-2024

Summary

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Official Symbol
ate1
Official Full Name
arginine-tRNA--protein transferase
Primary source
PomBase:SPAC3C7.07c
Locus tag
SPOM_SPAC3C7.07C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See ate1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
7
Sequence:
Chromosome: I; NC_003424.3 (2077107..2078843, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene serine/threonine protein kinase Pit1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene AAA family ATPase Elf1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene lysine methyltransferase Set8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article
  2. A central role for TOR signalling in a yeast model for juvenile CLN3 disease. Bond ME, et al. Microb Cell, 2015 Nov 11. PMID 28357272, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables arginyl-tRNA--protein transferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in proteasomal protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
NOT involved_in tRNA metabolic process NAS
Non-traceable Author Statement
more info
  
involved_in ubiquitin-dependent protein catabolic process via the N-end rule pathway ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
arginine-tRNA--protein transferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2077107..2078843 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019039.3 → NP_593608.2  arginine-tRNA--protein transferase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593608.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14133
    Conserved Domains (3) summary
    COG2935
    Location:41 → 288
    Ate1; Arginyl-tRNA--protein-N-Asp/Glu arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
    pfam04376
    Location:14 → 86
    ATE_N; Arginine-tRNA-protein transferase, N terminus
    pfam04377
    Location:139 → 271
    ATE_C; Arginine-tRNA-protein transferase, C terminus
Nucleotide Protein
Heading Accession and Version

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