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fsv1 SNARE Stx8 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542946, updated on 18-Sep-2024

Summary

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Official Symbol
fsv1
Official Full Name
SNARE Stx8
Primary source
PomBase:SPAC6F12.03c
Locus tag
SPOM_SPAC6F12.03C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
stx8; syn8
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Genomic context

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See fsv1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (1313236..1314480, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene AAA family ATPase involved in ubiquitin-mediated protein degradation Cdc48 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DNA-binding transcription factor, glucose starvation sensing, Rst2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Pro Neighboring gene COPI-coated vesicle-associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a SNARE protein required for vacuolar protein transport in Schizosaccharomyces pombe. Takegawa K, et al. Biochem Biophys Res Commun, 2003 Nov 7. PMID 14575697
  2. Vsl1p cooperates with Fsv1p for vacuolar protein transport and homotypic fusion in Schizosaccharomyces pombe. Hosomi A, et al. Microbiology (Reading), 2015 Jan. PMID 25378562
  3. Analysis of the SNARE Stx8 recycling reveals that the retromer-sorting motif has undergone evolutionary divergence. Yanguas F, et al. PLoS Genet, 2021 Mar. PMID 33788833, Free PMC Article
  4. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article
  5. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables SNAP receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables SNARE binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in Golgi to vacuole transport IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in Golgi to vacuole transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in endosomal vesicle fusion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in vacuole fusion IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in vesicle docking IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in vesicle fusion IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in Golgi trans cisterna IDA
Inferred from Direct Assay
more info
 PubMed 
part_of SNARE complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in endomembrane system IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in late endosome IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in late endosome membrane IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in trans-Golgi network IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
SNARE Stx8

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1313236..1314480 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018719.3 → NP_593289.1  SNARE Stx8 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593289.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14222, P78861
    Conserved Domains (1) summary
    cd15859
    Location:162 → 229
    SNARE_SYN8; SNARE motif of SYN8
Nucleotide Protein
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