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ups1 phosphatidic acid transfer protein Ups1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542962, updated on 18-Sep-2024

Summary

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Official Symbol
ups1
Official Full Name
phosphatidic acid transfer protein Ups1
Primary source
PomBase:SPAP8A3.10
Locus tag
SPOM_SPAP8A3.10
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See ups1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (5334073..5334807)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene serine/threonine protein phosphatase PP2A scaffold subunit Paa1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene GTPase Mtg2 Neighboring gene ncRNA Neighboring gene tripeptidyl-peptidase II Tpp2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure-function insights into direct lipid transfer between membranes by Mmm1-Mdm12 of ERMES. Kawano S, et al. J Cell Biol, 2018 Mar 5. PMID 29279306, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables phosphatidic acid transfer activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in intermembrane phospholipid transfer TAS
Traceable Author Statement
more info
 PubMed 
involved_in mitochondrial membrane organization IC
Inferred by Curator
more info
  
involved_in phospholipid translocation ISO
Inferred from Sequence Orthology
more info
  
involved_in phospholipid transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in extrinsic component of mitochondrial inner membrane ISO
Inferred from Sequence Orthology
more info
  
is_active_in mitochondrial intermembrane space IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in mitochondrion HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
phosphatidic acid transfer protein Ups1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    5334073..5334807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020380.3 → NP_594949.1  phosphatidic acid transfer protein Ups1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594949.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UT07
    Conserved Domains (1) summary
    pfam04707
    Location:16 → 166
    PRELI; PRELI-like family
Nucleotide Protein
Heading Accession and Version

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