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pdx3 pyridoxamine 5'-phosphate oxidase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542998, updated on 18-Sep-2024

Summary

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Official Symbol
pdx3
Official Full Name
pyridoxamine 5'-phosphate oxidase
Primary source
PomBase:SPAC1093.02
Locus tag
SPOM_SPAC1093.02
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See pdx3 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (4612115..4613297)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene PPR repeat-containing protein Ppr5 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene inositol polyphosphate phosphatase Neighboring gene tRNA nucleotidyltransferase Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables FMN binding IEA
Inferred from Electronic Annotation
more info
  
enables pyridoxamine phosphate oxidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in pyridoxamine metabolic process IC
Inferred by Curator
more info
  
involved_in pyridoxine biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
pyridoxamine 5'-phosphate oxidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4612115..4613297
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020078.3 → NP_594650.1  pyridoxamine 5'-phosphate oxidase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594650.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UTQ1
    Conserved Domains (3) summary
    COG0259
    Location:13 → 231
    PdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase [Coenzyme transport and metabolism]
    pfam01243
    Location:51 → 133
    Pyridox_oxidase; Pyridoxamine 5'-phosphate oxidase
    pfam10590
    Location:189 → 231
    PNPOx_C; Pyridoxine 5'-phosphate oxidase C-terminal dimerization region
Nucleotide Protein
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