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nod1 protein Nod1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543030, updated on 18-Sep-2024

Summary

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Official Symbol
nod1
Official Full Name
protein Nod1
Primary source
PomBase:SPAC12B10.10
Locus tag
SPOM_SPAC12B10.10
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See nod1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (4590166..4591524)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene tRNA(Ile)-lysidine synthetase family protein Neighboring gene ncRNA Neighboring gene putative S-adenosylmethionine transporter Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene glucan glucosidase exg2 Neighboring gene ncRNA Neighboring gene DNA repair protein Rhp41

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Fission yeast Nod1 is a component of cortical nodes involved in cell size control and division site placement. Jourdain I, et al. PLoS One, 2013. PMID 23349808, Free PMC Article
  2. Cooperation between Rho-GEF Gef2 and its binding partner Nod1 in the regulation of fission yeast cytokinesis. Zhu YH, et al. Mol Biol Cell, 2013 Oct. PMID 23966468, Free PMC Article
  3. Nanoscale architecture of the Schizosaccharomyces pombe contractile ring. McDonald NA, et al. Elife, 2017 Sep 15. PMID 28914606, Free PMC Article
  4. Systematic localization study on novel proteins encoded by meiotically up-regulated ORFs in fission yeast. Ikebe C, et al. Biosci Biotechnol Biochem, 2011. PMID 22146723
  5. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic cytokinesis, division site positioning IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in mitotic cytokinesis, division site positioning IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cell division site HDA PubMed 
is_active_in medial cortical node EXP
Inferred from Experiment
more info
 PubMed 
is_active_in medial cortical node IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in mitotic actomyosin contractile ring EXP
Inferred from Experiment
more info
 PubMed 
is_active_in mitotic actomyosin contractile ring IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in mitotic actomyosin contractile ring, intermediate layer IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
protein Nod1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4590166..4591524
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020070.3 → NP_594642.1  protein Nod1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594642.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q10443
    Conserved Domains (1) summary
    pfam17114
    Location:59 → 203
    Nod1; Gef2-related medial cortical node protein Nod1
Nucleotide Protein
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