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ucp6 UBA domain protein Ucp6 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543043, updated on 18-Sep-2024

Summary

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Official Symbol
ucp6
Official Full Name
UBA domain protein Ucp6
Primary source
PomBase:SPAC3F10.13
Locus tag
SPOM_SPAC3F10.13
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See ucp6 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (2845969..2848624)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene tRNA-Thr Neighboring gene ncRNA Neighboring gene Spo12 family nuclear protein Neighboring gene ncRNA Neighboring gene HSR1-like GTP-binding protein Neighboring gene ncRNA Neighboring gene ribosome biogenesis protein Ltv1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. UBA domain containing proteins in fission yeast. Hartmann-Petersen R, et al. Int J Biochem Cell Biol, 2003 May. PMID 12672455
  2. Proteins containing the UBA domain are able to bind to multi-ubiquitin chains. Wilkinson CR, et al. Nat Cell Biol, 2001 Oct. PMID 11584278
  3. A global census of fission yeast deubiquitinating enzyme localization and interaction networks reveals distinct compartmentalization profiles and overlapping functions in endocytosis and polarity. Kouranti I, et al. PLoS Biol, 2010 Sep 7. PMID 20838651, Free PMC Article
  4. Dual recruitment of Cdc48 (p97)-Ufd1-Npl4 ubiquitin-selective segregase by small ubiquitin-like modifier protein (SUMO) and ubiquitin in SUMO-targeted ubiquitin ligase-mediated genome stability functions. Nie M, et al. J Biol Chem, 2012 Aug 24. PMID 22730331, Free PMC Article
  5. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables polyubiquitin modification-dependent protein binding TAS
Traceable Author Statement
more info
 PubMed 
enables ubiquitin binding TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
UBA domain protein Ucp6

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2845969..2848624
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019373.3 → NP_593945.1  UBA domain protein Ucp6 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593945.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q10187
    Conserved Domains (2) summary
    COG0789
    Location:343 → 432
    SoxR; DNA-binding transcriptional regulator, MerR family [Transcription]
    cd14330
    Location:5 → 41
    UBA_atDRM2_like; UBA domain found in Arabidopsis thaliana DNA (cytosine-5)-methyltransferase DRM2 (atDRM2) and similar proteins
Nucleotide Protein
Heading Accession and Version

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