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pfl6 glycoprotein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543047, updated on 22-Jun-2024

Summary

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Gene symbol
pfl6
Gene description
glycoprotein
Locus tag
SPOM_SPAC977.07C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPAC977.07c
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Genomic context

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See pfl6 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (42057..43307, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene dehydrogenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular phylogenetics of ascomycotal adhesins--a novel family of putative cell-surface adhesive proteins in fission yeasts. Linder T, et al. Fungal Genet Biol, 2008 Apr. PMID 17870620
  2. Deciphering the transcriptional-regulatory network of flocculation in Schizosaccharomyces pombe. Kwon EJ, et al. PLoS Genet, 2012. PMID 23236291, Free PMC Article
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables cell adhesion mediator activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in flocculation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in external side of cell wall TAS
Traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    42057..43307 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018179.1 → NP_592779.1  glycoprotein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_592779.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0CU04, P0CU05, Q9P329
    Conserved Domains (1) summary
    pfam10528
    Location:278 → 394
    PA14_2; GLEYA domain
Nucleotide Protein
Heading Accession and Version

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