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duf8901 cobalt/nickel-dependent phosphatase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543077, updated on 18-Sep-2024

Summary

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Official Symbol
duf8901
Official Full Name
cobalt/nickel-dependent phosphatase
Primary source
PomBase:SPAC806.04c
Locus tag
SPOM_SPAC806.04C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See duf8901 in Genome Data Viewer
Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003424.3 (241008..242971, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene nicotinamide mononucleotide adenylyltransferase Neighboring gene LYR family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Fission yeast Duf89 and Duf8901 are cobalt/nickel-dependent phosphatase-pyrophosphatases that act via a covalent aspartyl-phosphate intermediate. Sanchez AM, et al. J Biol Chem, 2022 May. PMID 35314193, Free PMC Article
  2. A family of metal-dependent phosphatases implicated in metabolite damage-control. Huang L, et al. Nat Chem Biol, 2016 Aug. PMID 27322068, Free PMC Article
  3. A genetic screen to discover pathways affecting cohesin function in Schizosaccharomyces pombe identifies chromatin effectors. Chen Z, et al. G3 (Bethesda), 2012 Oct. PMID 23050226, Free PMC Article
  4. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
  5. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables fructose 6-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
  
enables fructose-1-phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables inorganic diphosphate phosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables metal ion binding EXP
Inferred from Experiment
more info
 PubMed 
enables phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables phosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in cellular detoxification ISM
Inferred from Sequence Model
more info
 PubMed 
involved_in intracellular phosphate ion homeostasis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
cobalt/nickel-dependent phosphatase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    241008..242971 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018255.3 → NP_592854.2  cobalt/nickel-dependent phosphatase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_592854.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UT55
    Conserved Domains (1) summary
    pfam01937
    Location:23 → 416
    DUF89; Protein of unknown function DUF89
Nucleotide Protein
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