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ndk1 nucleoside diphosphate kinase Ndk1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543111, updated on 18-Sep-2024

Summary

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Official Symbol
ndk1
Official Full Name
nucleoside diphosphate kinase Ndk1
Primary source
PomBase:SPAC806.07
Locus tag
SPOM_SPAC806.07
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See ndk1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (247892..248560)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene nicotinamide mononucleotide adenylyltransferase Neighboring gene LYR family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene gamma tubulin complex GCP5 subunit Mod21 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning and functional analysis of the ndk1 gene encoding nucleoside-diphosphate kinase in Schizosaccharomyces pombe. Izumiya H, et al. J Biol Chem, 1995 Nov 17. PMID 7499258
  2. Global coordination of transcriptional control and mRNA decay during cellular differentiation. Amorim MJ, et al. Mol Syst Biol, 2010 Jun 8. PMID 20531409, Free PMC Article
  3. Cross-species protein interactome mapping reveals species-specific wiring of stress response pathways. Das J, et al. Sci Signal, 2013 May 21. PMID 23695164, Free PMC Article
  4. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
  5. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables nucleoside diphosphate kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables nucleoside diphosphate kinase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in CTP biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in GTP biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in UTP biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in mitochondrial intermembrane space ISO
Inferred from Sequence Orthology
more info
  
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
nucleoside diphosphate kinase Ndk1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    247892..248560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018258.3 → NP_592857.1  nucleoside diphosphate kinase Ndk1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_592857.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P49740
    Conserved Domains (2) summary
    cl00335
    Location:2 → 150
    NDPk; Nucleoside diphosphate kinases (NDP kinases, NDPks): NDP kinases, responsible for the synthesis of nucleoside triphosphates (NTPs), are involved in numerous regulatory processes associated with proliferation, development, and differentiation. They are ...
    pfam00334
    Location:4 → 138
    NDK; Nucleoside diphosphate kinase
Nucleotide Protein
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