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slf1 protein Slf1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543199, updated on 18-Sep-2024

Summary

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Official Symbol
slf1
Official Full Name
protein Slf1
Primary source
PomBase:SPAC821.03c
Locus tag
SPOM_SPAC821.03C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See slf1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (981473..983497, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Srp1 family splicing factor Neighboring gene ncRNA Neighboring gene COP9/signalosome complex subunit Csn3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene cytoplasmic poly(A) polymerase Cid13 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Megadalton-node assembly by binding of Skb1 to the membrane anchor Slf1. Deng L, et al. Mol Biol Cell, 2014 Sep 1. PMID 25009287, Free PMC Article
  2. The fission yeast nucleoporin Alm1 is required for proteasomal degradation of kinetochore components. Salas-Pino S, et al. J Cell Biol, 2017 Nov 6. PMID 28974540, Free PMC Article
  3. Chromatin remodeller Fun30(Fft3) induces nucleosome disassembly to facilitate RNA polymerase II elongation. Lee J, et al. Nat Commun, 2017 Feb 20. PMID 28218250, Free PMC Article
  4. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in lateral cortical node assembly IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in protein localization to lateral cortical node IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of lateral cortical node IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
protein Slf1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    981473..983497 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018554.3 → NP_593156.1  protein Slf1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593156.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UT50
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials