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med6 mediator complex subunit Med6 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543263, updated on 18-Sep-2024

Summary

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Official Symbol
med6
Official Full Name
mediator complex subunit Med6
Primary source
PomBase:SPAC1002.15c
Locus tag
SPOM_SPAC1002.15C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
pmc5
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Genomic context

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See med6 in Genome Data Viewer
Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003424.3 (1824486..1827118, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene beta-glucosidase Psu1 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ubiquitin-protein ligase E3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene nicotinic acid plasma membrane transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Condensin targets and reduces unwound DNA structures associated with transcription in mitotic chromosome condensation. Sutani T, et al. Nat Commun, 2015 Jul 23. PMID 26204128, Free PMC Article
  2. Purification and characterization of RNA polymerase II holoenzyme from Schizosaccharomyces pombe. Spåhr H, et al. J Biol Chem, 2000 Jan 14. PMID 10625684
  3. Core Mediator structure at 3.4 Å extends model of transcription initiation complex. Nozawa K, et al. Nature, 2017 May 11. PMID 28467824
  4. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables transcription coactivator activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables transcription coactivator activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription initiation by RNA polymerase II EXP
Inferred from Experiment
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of core mediator complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of mediator complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of mediator complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
mediator complex subunit Med6

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1824486..1827118 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018937.3 → NP_593503.1  mediator complex subunit Med6 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593503.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9US45
    Conserved Domains (1) summary
    COG5097
    Location:2 → 216
    MED6; RNA polymerase II transcriptional regulation mediator [Transcription]
Nucleotide Protein
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