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sdd3 metallopeptidase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543450, updated on 22-Jun-2024

Summary

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Gene symbol
sdd3
Gene description
metallopeptidase
Locus tag
SPOM_SPAC3H1.02C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
ppp54
Old locus tag
SPAC3H1.02c
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Genomic context

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See sdd3 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (1931489..1934884, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene origin recognition complex subunit Orp3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene transcriptional regulator HCNGP-like protein Neighboring gene ncRNA Neighboring gene protein Mdm31

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Degradation of the amyloid beta-protein by the novel mitochondrial peptidasome, PreP. Falkevall A, et al. J Biol Chem, 2006 Sep 29. PMID 16849325
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metalloendopeptidase activity ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in mitochondrial protein catabolic process TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
metallopeptidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1931489..1934884 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018977.3 → NP_593544.1  metallopeptidase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593544.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q10068
    Conserved Domains (1) summary
    COG1026
    Location:3 → 1015
    Cym1; Zn-dependent peptidase, M16 (insulinase) family [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials