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pmc1 P2 type calcium transporting P-type ATPase Pmc1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543477, updated on 18-Sep-2024

Summary

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Official Symbol
pmc1
Official Full Name
P2 type calcium transporting P-type ATPase Pmc1
Primary source
PomBase:SPAPB2B4.04c
Locus tag
SPOM_SPAPB2B4.04C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See pmc1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (2712704..2718022, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene mitochondrial [2Fe-2S] cluster assembly and transfer glutaredoxin Grx5 Neighboring gene ncRNA Neighboring gene G1/S-specific B-type cyclin Cig2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Schizosaccharomyces pombe Pmr1p is essential for cell wall integrity and is required for polarized cell growth and cytokinesis. Cortés JC, et al. Eukaryot Cell, 2004 Oct. PMID 15470240, Free PMC Article
  2. Real-time monitoring of calcineurin activity in living cells: evidence for two distinct Ca2+-dependent pathways in fission yeast. Deng L, et al. Mol Biol Cell, 2006 Nov. PMID 16928959, Free PMC Article
  3. Global coordination of transcriptional control and mRNA decay during cellular differentiation. Amorim MJ, et al. Mol Syst Biol, 2010 Jun 8. PMID 20531409, Free PMC Article
  4. The fission yeast FLCN/FNIP complex augments TORC1 repression or activation in response to amino acid (AA) availability. Calvo IA, et al. iScience, 2021 Nov 19. PMID 34805795, Free PMC Article
  5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding IC
Inferred by Curator
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables P-type calcium transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables calcium ion binding ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport ISO
Inferred from Sequence Orthology
more info
  
involved_in intracellular calcium ion homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in intracellular calcium ion homeostasis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in fungal-type vacuole membrane IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
P2 type calcium transporting P-type ATPase Pmc1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2712704..2718022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019320.3 → NP_593890.1  P2 type calcium transporting P-type ATPase Pmc1 [Schizosaccharomyces pombe]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9HDW7, Q9UTX0
    Conserved Domains (6) summary
    COG4087
    Location:838 → 916
    COG4087; Soluble P-type ATPase [General function prediction only]
    TIGR01517
    Location:97 → 1140
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:316 → 534
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:966 → 1137
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:206 → 248
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam13246
    Location:624 → 704
    Cation_ATPase; Cation transport ATPase (P-type)
Nucleotide Protein
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