U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SPAC823.11 putative sphingosine-1-phosphate phosphatase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543496, updated on 20-May-2024

Summary

Go to the top of the page Help
Gene symbol
SPAC823.11
Gene description
putative sphingosine-1-phosphate phosphatase
Primary source
PomBase:SPAC823.11
Locus tag
SPAC823.11
See related
FungiDB:SPAC823.11; VEuPathDB:SPAC823.11
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SPAC823.11 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003424.3 (2598197..2600285)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene putative threonine aspartase Neighboring gene putative solute carrier repeat-containing protein Neighboring gene miscRNA Neighboring gene putative HOPs complex subunit Pep5/Vps11 Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene putative phosphoric monoester hydrolase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables sphingosine-1-phosphate phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in sphingolipid biosynthetic process ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
putative sphingosine-1-phosphate phosphatase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2598197..2600285
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019267.2 → NP_593838.1  putative sphingosine-1-phosphate phosphatase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593838.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9P6N5
    Conserved Domains (2) summary
    COG0671
    Location:34 → 226
    PgpB; Membrane-associated phospholipid phosphatase [Lipid transport and metabolism]
    cd03388
    Location:63 → 218
    PAP2_SPPase1; PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous