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amt2 plasma membrane ammonium transmembrane transporter Amt2 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543501, updated on 18-Sep-2024

Summary

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Official Symbol
amt2
Official Full Name
plasma membrane ammonium transmembrane transporter Amt2
Primary source
PomBase:SPAC664.14
Locus tag
SPOM_SPAC664.14
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See amt2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (1731069..1733268)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene succinate dehydrogenase assembly factor 1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Lys Neighboring gene ncRNA Neighboring gene CCR4-Not complex subunit Caf4/Mdv1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Ammonium transporter genes in the fission yeast Schizosaccharomyces pombe: role in ammonium uptake and a morphological transition. Mitsuzawa H. Genes Cells, 2006 Oct. PMID 16999738
  2. High-Throughput Identification of Nuclear Envelope Protein Interactions in Schizosaccharomyces pombe Using an Arrayed Membrane Yeast-Two Hybrid Library. Varberg JM, et al. G3 (Bethesda), 2020 Dec 3. PMID 33109728, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ammonium channel activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables ammonium channel activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables methylammonium transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in ammonium transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in ammonium transmembrane transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in methylammonium transmembrane transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
plasma membrane ammonium transmembrane transporter Amt2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1731069..1733268
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018895.3 → NP_593462.1  plasma membrane ammonium transmembrane transporter Amt2 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593462.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9US00, Q9UU53
    Conserved Domains (1) summary
    COG0004
    Location:42 → 464
    AmtB; Ammonia channel protein AmtB [Inorganic ion transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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