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lip2 lipoate-protein ligase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543640, updated on 22-Jun-2024

Summary

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Gene symbol
lip2
Gene description
lipoate-protein ligase
Locus tag
SPOM_SPAC4F10.05C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Old locus tag
SPAC4F10.05c
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Genomic context

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See lip2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (4837605..4838450, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene tRNA 2'-O-ribose methyltransferase Neighboring gene ncRNA Neighboring gene type 2A protein phosphatase regulator Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene BUD22 family ribosome small subunit biogenesis protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteomic profiling and functional characterization of post-translational modifications of the fission yeast RNA exosome. Telekawa C, et al. Nucleic Acids Res, 2018 Nov 30. PMID 30321377, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables lipoyl(octanoyl) transferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in glycine catabolic process NAS
Non-traceable Author Statement
more info
  
involved_in protein lipoylation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
lipoate-protein ligase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4837605..4838450 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020175.3 → NP_594748.1  lipoate-protein ligase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594748.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O36017
    Conserved Domains (1) summary
    COG0321
    Location:5 → 219
    LipB; Lipoate-protein ligase B [Coenzyme transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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