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med11 mediator complex subunit Med11 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543656, updated on 18-Sep-2024

Summary

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Official Symbol
med11
Official Full Name
mediator complex subunit Med11
Primary source
PomBase:SPAC644.10
Locus tag
SPOM_SPAC644.10
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See med11 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (2691278..2692150)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene pyridoxal phosphate homeostasis protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene [pyruvate dehydrogenase (acetyl-transferring)] kinase Pkp1 Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure of the Mediator head module. Larivière L, et al. Nature, 2012 Dec 20. PMID 23123849
  2. Core Mediator structure at 3.4 Å extends model of transcription initiation complex. Nozawa K, et al. Nature, 2017 May 11. PMID 28467824
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables transcription coactivator activity ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in positive regulation of transcription initiation by RNA polymerase II EXP
Inferred from Experiment
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of mediator complex IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
mediator complex subunit Med11

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2691278..2692150
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019308.3 → NP_593878.1  mediator complex subunit Med11 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593878.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9P6Q0
    Conserved Domains (1) summary
    pfam10280
    Location:19 → 92
    Med11; Mediator complex protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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