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slm1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543674, updated on 11-Sep-2024

Summary

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Official Symbol
slm1
Primary source
PomBase:SPAC637.13c
Locus tag
SPOM_SPAC637.13C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (4563609..4565406, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ATP-dependent RNA helicase Rpm2 Neighboring gene histone acetyltransferase, KAT5 family Mst1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene zds family phosphatase type A regulator Zds1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The filament-forming protein Pil1 assembles linear eisosomes in fission yeast. Kabeche R, et al. Mol Biol Cell, 2011 Nov. PMID 21900489, Free PMC Article
  2. A systematic screen for morphological abnormalities during fission yeast sexual reproduction identifies a mechanism of actin aster formation for cell fusion. Dudin O, et al. PLoS Genet, 2017 Apr. PMID 28410370, Free PMC Article
  3. Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth. Rallis C, et al. Biol Open, 2014 Feb 15. PMID 24463365, Free PMC Article
  4. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article
  5. Chromatin remodeller Fun30(Fft3) induces nucleosome disassembly to facilitate RNA polymerase II elongation. Lee J, et al. Nat Commun, 2017 Feb 20. PMID 28218250, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables phosphatidylinositol binding ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in cell-cell fusion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in mating projection actin fusion focus assembly IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cell cortex of cell tip IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytoplasmic side of plasma membrane EXP
Inferred from Experiment
more info
 PubMed 
is_active_in eisosome ISO
Inferred from Sequence Orthology
more info
  
is_active_in mating projection membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
cytoskeletal signaling protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4563609..4565406 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020059.3 → NP_594631.1  cytoskeletal signaling protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594631.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94447
    Conserved Domains (3) summary
    cd13311
    Location:299 → 405
    PH_Slm1; Slm1 Pleckstrin homology (PH) domain
    pfam00169
    Location:301 → 405
    PH; PH domain
    cl12013
    Location:48 → 159
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
Nucleotide Protein
Heading Accession and Version

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