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rad55 DNA recombination mediator, RecA family ATPase Rad55/Rhp55 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543685, updated on 18-Sep-2024

Summary

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Official Symbol
rad55
Official Full Name
DNA recombination mediator, RecA family ATPase Rad55/Rhp55
Primary source
PomBase:SPAC3C7.03c
Locus tag
SPOM_SPAC3C7.03C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
rhp55
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Genomic context

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See rad55 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (2066442..2067914, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene eisosome BAR domain-containing protein Pil2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. [Analysis of mutations in the mat1 region of Schizosaccharomyces pombe strain with the deletion of gene rhp55+]. Vagin DA, et al. Genetika, 2006 May. PMID 16808240
  2. [The role of recombinational repair proteins in mating type switching in fission yeast cells]. Vagin DA, et al. Genetika, 2006 Apr. PMID 16756067
  3. [The dds20+ gene controls a novel Rad51Sp-dependent pathway of recombinational repair in Schizosaccharomyces pombe]. Salakhova AF, et al. Genetika, 2005 Jun. PMID 16080597
  4. Mus81-Eme1-dependent and -independent crossovers form in mitotic cells during double-strand break repair in Schizosaccharomyces pombe. Hope JC, et al. Mol Cell Biol, 2007 May. PMID 17353272, Free PMC Article
  5. Swi5 acts in meiotic DNA joint molecule formation in Schizosaccharomyces pombe. Ellermeier C, et al. Genetics, 2004 Dec. PMID 15466419, Free PMC Article

See all (43) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. rqh1 plays a role late in HR following replication arrest and Rhp55/57 has a postsynaptic function
    Title: A postsynaptic role for Rhp55/57 that is responsible for cell death in Deltarqh1 mutants following replication arrest in Schizosaccharomyces pombe.
  2. mutation in rhp55 gene may lead to the aberrant gene conversion
    Title: [Analysis of mutations in the mat1 region of Schizosaccharomyces pombe strain with the deletion of gene rhp55+].
  3. genes rhp51+ and rhp55+ are involved not only in the repair of induced DNA double-strand breaks, but also in the mechanism of mating type switching in fission yeast.
    Title: [The role of recombinational repair proteins in mating type switching in fission yeast cells].
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding ISM
Inferred from Sequence Model
more info
  
enables ATP hydrolysis activity NAS
Non-traceable Author Statement
more info
  
enables ATP-dependent DNA damage sensor activity IEA
Inferred from Electronic Annotation
more info
  
contributes_to crossover junction DNA endonuclease activity IBA
Inferred from Biological aspect of Ancestor
more info
  
contributes_to four-way junction DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in DNA strand invasion TAS
Traceable Author Statement
more info
 PubMed 
involved_in double-strand break repair via homologous recombination IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in meiotic DNA recombinase assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in meiotic joint molecule formation TAS
Traceable Author Statement
more info
 PubMed 
involved_in reciprocal meiotic recombination IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in reciprocal meiotic recombination IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in reciprocal meiotic recombination IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of Rad51B-Rad51C-Rad51D-XRCC2 complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of Rad51C-XRCC3 complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 
is_active_in replication fork IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in site of double-strand break IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
DNA recombination mediator, RecA family ATPase Rad55/Rhp55

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2066442..2067914 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019035.3 → NP_593604.1  DNA recombination mediator, RecA family ATPase Rad55/Rhp55 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593604.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14129
    Conserved Domains (2) summary
    COG0468
    Location:1 → 295
    RecA; RecA/RadA recombinase [Replication, recombination and repair]
    cl21455
    Location:29 → 327
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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