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Ehd2 EH-domain containing 2 [ Mus musculus (house mouse) ]

Gene ID: 259300, updated on 2-Nov-2024

Summary

Official Symbol
Ehd2provided by MGI
Official Full Name
EH-domain containing 2provided by MGI
Primary source
MGI:MGI:2154274
See related
Ensembl:ENSMUSG00000074364 AllianceGenome:MGI:2154274
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
C130052H20Rik
Summary
Enables identical protein binding activity and protein domain specific binding activity. Involved in several processes, including plasma membrane tubulation; positive regulation of endocytic recycling; and positive regulation of myoblast fusion. Acts upstream of or within cortical actin cytoskeleton organization and endocytosis. Located in caveola; cytosol; and perinuclear region of cytoplasm. Is expressed in several structures, including brown fat; neural tube; and vascular element. Orthologous to human EHD2 (EH domain containing 2). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in subcutaneous fat pad adult (RPKM 159.7), genital fat pad adult (RPKM 103.2) and 13 other tissues See more
Orthologs
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Genomic context

See Ehd2 in Genome Data Viewer
Location:
7 A2; 7 8.65 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (15680883..15701402, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (15946963..15967535, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E2813 Neighboring gene selenoprotein W Neighboring gene STARR-positive B cell enhancer ABC_E2814 Neighboring gene small nucleolar RNA, C/D box 23 Neighboring gene NOP53 ribosome biogenesis factor Neighboring gene predicted gene, 24576 Neighboring gene STARR-positive B cell enhancer ABC_E11342 Neighboring gene STARR-seq mESC enhancer starr_18118 Neighboring gene STARR-seq mESC enhancer starr_18119 Neighboring gene BRD4 interacting chromatin remodeling complex associated protein Neighboring gene predicted gene, 38948 Neighboring gene STARR-positive B cell enhancer ABC_E6514 Neighboring gene RIKEN cDNA 2010004M13 gene Neighboring gene STARR-positive B cell enhancer ABC_E1078

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (4) 
  • Targeted (2) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC25606, MGC38650

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein domain specific binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within cortical actin cytoskeleton organization IDA
Inferred from Direct Assay
more info
PubMed 
involved_in endocytic recycling IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in endocytic recycling ISO
Inferred from Sequence Orthology
more info
 
involved_in endocytic recycling ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in endocytosis IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within endocytosis IDA
Inferred from Direct Assay
more info
PubMed 
involved_in plasma membrane tubulation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of endocytic recycling IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of myoblast fusion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein localization to plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein localization to plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in caveola IDA
Inferred from Direct Assay
more info
PubMed 
located_in caveola ISO
Inferred from Sequence Orthology
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in early endosome IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in endocytic vesicle IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in intercellular bridge IEA
Inferred from Electronic Annotation
more info
 
located_in intercellular bridge ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
located_in microtubule cytoskeleton ISO
Inferred from Sequence Orthology
more info
 
is_active_in perinuclear region of cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in perinuclear region of cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
is_active_in recycling endosome membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in recycling endosome membrane ISO
Inferred from Sequence Orthology
more info
 
located_in recycling endosome membrane ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
EH domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001419312.1NP_001406241.1  EH domain-containing protein 2 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC148990
  2. NM_001419313.1NP_001406242.1  EH domain-containing protein 2 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC148990
    UniProtKB/Swiss-Prot
    Q8BH64, Q8BL28
  3. NM_153068.4NP_694708.2  EH domain-containing protein 2 isoform 1

    See identical proteins and their annotated locations for NP_694708.2

    Status: VALIDATED

    Source sequence(s)
    AC148990
    Consensus CDS
    CCDS20842.1
    UniProtKB/Swiss-Prot
    Q8BH64, Q8BL28
    UniProtKB/TrEMBL
    Q8R2X0
    Related
    ENSMUSP00000096397.4, ENSMUST00000098799.5
    Conserved Domains (4) summary
    smart00027
    Location:443536
    EH; Eps15 homology domain
    cd09913
    Location:60300
    EHD; Eps15 homology domain (EHD), C-terminal domain
    pfam16880
    Location:2556
    EHD_N; N-terminal EH-domain containing protein
    pfam18150
    Location:288394
    DUF5600; Domain of unknown function (DUF5600)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    15680883..15701402 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)