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ZK1320.7 G patch domain and ankyrin repeat-containing protein 1 homolog [ Caenorhabditis elegans ]

Gene ID: 259457, updated on 2-Nov-2024

Summary

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Official Symbol
ZK1320.7
Official Full Name
G patch domain and ankyrin repeat-containing protein 1 homolog
Primary source
WormBase:WBGene00014256
Locus tag
CELE_ZK1320.7
See related
AllianceGenome:WB:WBGene00014256
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable nucleic acid binding activity. Orthologous to human GPANK1 (G-patch domain and ankyrin repeats 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ZK1320.7 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003280.10 (9671608..9673263)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene BTB domain-containing protein Neighboring gene Transcription initiation factor TFIID subunit 8 Neighboring gene E3 ubiquitin-protein ligase arc-1 Neighboring gene Purkinje cell protein 4-like protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Caenorhabditis elegans in the study of SMN-interacting proteins: a role for SMI-1, an orthologue of human Gemin2 and the identification of novel components of the SMN complex. Burt EC, et al. Invert Neurosci, 2006 Dec. PMID 16964508
  2. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
G patch domain and ankyrin repeat-containing protein 1 homolog
NP_496087.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    9671608..9673263
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063686.3 → NP_496087.2  G patch domain and ankyrin repeat-containing protein 1 homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496087.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q09655
    Conserved Domains (4) summary
    cd00204
    Location:109 → 200
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01585
    Location:263 → 307
    G-patch; G-patch domain
    pfam12796
    Location:119 → 206
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:117 → 145
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q09655.3

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