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F07F6.7 Apolipoprotein L, 1 [ Caenorhabditis elegans ]

Gene ID: 260090, updated on 2-Nov-2024

Summary

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Official Symbol
F07F6.7
Official Full Name
Apolipoprotein L, 1
Primary source
WormBase:WBGene00017219
Locus tag
CELE_F07F6.7
See related
AllianceGenome:WB:WBGene00017219
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable lipid binding activity. Predicted to be involved in lipid transport and lipoprotein metabolic process. Predicted to be located in extracellular region. Orthologous to human APOL3 (apolipoprotein L3). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F07F6.7 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (5422735..5423858, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene PHR domain-containing protein Neighboring gene ncRNA Neighboring gene Embryonic developmental protein tofu-6 Neighboring gene Apolipoprotein L3-like Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables lipid binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables lipid binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
  
involved_in lipoprotein metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Apolipoprotein L, 1
NP_740988.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    5422735..5423858 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_170990.2 → NP_740988.1  Apolipoprotein L, 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_740988.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8WQF8
    Conserved Domains (1) summary
    pfam05461
    Location:4 → 247
    ApoL; Apolipoprotein L
Nucleotide Protein
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Gene LinkOut

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