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PF3D7_0814200 DNA/RNA-binding protein Alba 1 [ Plasmodium falciparum 3D7 ]

Gene ID: 2655273, updated on 12-Sep-2024

Summary

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Gene symbol
PF3D7_0814200
Gene description
DNA/RNA-binding protein Alba 1
Locus tag
PF3D7_0814200
See related
PlasmoDB:PF3D7_0814200; VEuPathDB:PF3D7_0814200
Gene type
protein coding
RNA name
DNA/RNA-binding protein Alba 1
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
Orthologs
all
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Genomic context

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See PF3D7_0814200 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
1
Sequence:
Chromosome: 8; NC_004329.3 (687340..688086)

Chromosome 8 - NC_004329.3Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L13-2, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene AAA family ATPase, putative Neighboring gene phospholipase DDHD1, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004329.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The PfAlba1 RNA-binding protein is an important regulator of translational timing in Plasmodium falciparum blood stages. Vembar SS, et al. Genome Biol, 2015 Sep 28. PMID 26415947, Free PMC Article
  2. PfAlbas constitute a new eukaryotic DNA/RNA-binding protein family in malaria parasites. Chêne A, et al. Nucleic Acids Res, 2012 Apr. PMID 22167473, Free PMC Article
  3. The mRNA-bound proteome of the human malaria parasite Plasmodium falciparum. Bunnik EM, et al. Genome Biol, 2016 Jul 5. PMID 27381095, Free PMC Article
  4. Food vacuole proteome of the malarial parasite Plasmodium falciparum. Lamarque M, et al. Proteomics Clin Appl, 2008 Sep. PMID 21136929
  5. Proteomic analysis of extracellular vesicles from a Plasmodium falciparum Kenyan clinical isolate defines a core parasite secretome. Abdi A, et al. Wellcome Open Res, 2017. PMID 28944300, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables DNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables RNA binding HDA PubMed 
enables RNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables mRNA binding HDA PubMed 
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables mRNA regulatory element binding translation repressor activity IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in extracellular vesicle HDA PubMed 
located_in food vacuole HDA PubMed 
located_in nucleus HDA PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
DNA/RNA-binding protein Alba 1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004329.3 Reference assembly

    Range
    687340..688086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001349347.1 → XP_001349383.1  DNA/RNA-binding protein Alba 1 [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001349383.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q8IAX8
    UniProtKB/TrEMBL
    A0A024V896, A0A024VRT5, A0A024W9F0, A0A024WT82, A0A024XA43, A0A0L7KCZ1, W4IHY9, W4IS12, W7F329, W7G032, W7JQ32, W7JW62
    Conserved Domains (1) summary
    pfam01918
    Location:12 → 76
    Alba
Nucleotide Protein
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