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Sgk2 serum/glucocorticoid regulated kinase 2 [ Mus musculus (house mouse) ]

Gene ID: 27219, updated on 28-Oct-2024

Summary

Official Symbol
Sgk2provided by MGI
Official Full Name
serum/glucocorticoid regulated kinase 2provided by MGI
Primary source
MGI:MGI:1351318
See related
Ensembl:ENSMUSG00000017868 AllianceGenome:MGI:1351318
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Sgkl
Summary
Predicted to enable potassium channel regulator activity and protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction. Predicted to be located in nucleoplasm. Orthologous to human SGK2 (serum/glucocorticoid regulated kinase 2). [provided by Alliance of Genome Resources, Oct 2024]
Expression
Biased expression in kidney adult (RPKM 26.4), liver adult (RPKM 9.0) and 7 other tissues See more
Orthologs
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Genomic context

See Sgk2 in Genome Data Viewer
Location:
2 H2; 2 83.93 cM
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (162829249..162856059)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (162987327..163014139)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene L3MBTL1 histone methyl-lysine binding protein Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene intraflagellar transport 52 Neighboring gene STARR-seq mESC enhancer starr_06293 Neighboring gene STARR-seq mESC enhancer starr_06295 Neighboring gene STARR-positive B cell enhancer ABC_E6013 Neighboring gene myeloblastosis oncogene-like 2 Neighboring gene microRNA 7003

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables histone H2AS1 kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables potassium channel regulator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables potassium channel regulator activity ISO
Inferred from Sequence Orthology
more info
 
enables potassium channel regulator activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein serine kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 
involved_in intracellular signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
serine/threonine-protein kinase Sgk2
NP_001278081.1
NP_001278083.1
NP_038759.1
XP_006499721.1
XP_006499723.1
XP_011237882.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001291152.1NP_001278081.1  serine/threonine-protein kinase Sgk2 isoform b

    See identical proteins and their annotated locations for NP_001278081.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1, resulting in an isoform (b) that is 1 aa shorter than isoform a. The 5' UTR of this variant is incomplete due to lack of a complete transcript and splice pattern ambiguity in the upstream region.
    Source sequence(s)
    AK050009, AK136559, AV370098, BB350718
    UniProtKB/TrEMBL
    Q3UW73
    Conserved Domains (2) summary
    smart00220
    Location:35291
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:39358
    PKc_like; Protein Kinases, catalytic domain
  2. NM_001291154.1NP_001278083.1  serine/threonine-protein kinase Sgk2 isoform c

    See identical proteins and their annotated locations for NP_001278083.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR and lacks an alternate in-frame exon in the central coding region, compared to variant 1. The encoded isoform (c) is shorter than isoform a.
    Source sequence(s)
    AI747981, AK050009, AL591584, AV370098, BB350718
    Consensus CDS
    CCDS71184.1
    UniProtKB/TrEMBL
    Q3UW73
    Related
    ENSMUSP00000112468.2, ENSMUST00000117123.2
    Conserved Domains (1) summary
    cl21453
    Location:39330
    PKc_like; Protein Kinases, catalytic domain
  3. NM_013731.3NP_038759.1  serine/threonine-protein kinase Sgk2 isoform a

    See identical proteins and their annotated locations for NP_038759.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (a).
    Source sequence(s)
    AI747981, AK050009, AK136559, AV370098, BB350718
    Consensus CDS
    CCDS17004.1
    UniProtKB/Swiss-Prot
    B7ZC31, Q8R0P6, Q9QZS5
    UniProtKB/TrEMBL
    Q3UW73
    Related
    ENSMUSP00000018012.8, ENSMUST00000018012.14
    Conserved Domains (1) summary
    cl21453
    Location:39359
    PKc_like; Protein Kinases, catalytic domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    162829249..162856059
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006499660.5XP_006499723.1  serine/threonine-protein kinase Sgk2 isoform X3

    Conserved Domains (1) summary
    cl21453
    Location:39283
    PKc_like; Protein Kinases, catalytic domain
  2. XM_011239580.3XP_011237882.1  serine/threonine-protein kinase Sgk2 isoform X2

    See identical proteins and their annotated locations for XP_011237882.1

    UniProtKB/TrEMBL
    Q3UW73
    Conserved Domains (1) summary
    cl21453
    Location:39330
    PKc_like; Protein Kinases, catalytic domain
  3. XM_006499658.5XP_006499721.1  serine/threonine-protein kinase Sgk2 isoform X1

    See identical proteins and their annotated locations for XP_006499721.1

    UniProtKB/Swiss-Prot
    B7ZC31, Q8R0P6, Q9QZS5
    UniProtKB/TrEMBL
    Q3UW73
    Conserved Domains (1) summary
    cl21453
    Location:39359
    PKc_like; Protein Kinases, catalytic domain