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RHTO_08165 sodium/potassium-transporting ATPase subunit alpha [ Rhodotorula toruloides NP11 ]

Gene ID: 27372178, updated on 3-Jan-2024

Summary

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Gene symbol
RHTO_08165
Gene description
sodium/potassium-transporting ATPase subunit alpha
Locus tag
RHTO_08165
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rhodotorula toruloides NP11 (strain: NP11)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Microbotryomycetes; Sporidiobolales; Sporidiobolaceae; Rhodotorula
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Genomic context

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See RHTO_08165 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
13

NW_015622969.1Genomic Context describing neighboring genes Neighboring gene peptidase cysteine/serine, trypsin-like protein Neighboring gene putative membrane permease Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015622969.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A multi-omic map of the lipid-producing yeast Rhodosporidium toruloides. Zhu Z, et al. Nat Commun, 2012. PMID 23047670, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type sodium:potassium-exchanging transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular potassium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular sodium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion export across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/potassium-transporting ATPase subunit alpha

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_015622969.1 Reference assembly

    Range
    601308..605391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016421819.1 → XP_016273931.1  sodium/potassium-transporting ATPase subunit alpha [Rhodotorula toruloides NP11]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M7WQL1
    Conserved Domains (6) summary
    smart00831
    Location:99 → 171
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    COG4087
    Location:749 → 813
    COG4087; Soluble P-type ATPase [General function prediction only]
    TIGR01106
    Location:88 → 1073
    ATPase-IIC_X-K; sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit
    pfam00122
    Location:201 → 405
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:860 → 1061
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam13246
    Location:467 → 573
    Cation_ATPase; Cation transport ATPase (P-type)
Nucleotide Protein
Heading Accession and Version

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