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RHTO_08166 uncharacterized protein [ Rhodotorula toruloides NP11 ]

Gene ID: 27372179, updated on 3-Jan-2024

Summary

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Gene symbol
RHTO_08166
Gene description
uncharacterized protein
Locus tag
RHTO_08166
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rhodotorula toruloides NP11 (strain: NP11)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Microbotryomycetes; Sporidiobolales; Sporidiobolaceae; Rhodotorula
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Genomic context

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See RHTO_08166 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_015622969.1Genomic Context describing neighboring genes Neighboring gene putative membrane permease Neighboring gene sodium/potassium-transporting ATPase subunit alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015622969.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A multi-omic map of the lipid-producing yeast Rhodosporidium toruloides. Zhu Z, et al. Nat Commun, 2012. PMID 23047670, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SAGA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_015622969.1 Reference assembly

    Range
    605635..607908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016421820.1 → XP_016273932.1  uncharacterized protein RHTO_08166 [Rhodotorula toruloides NP11]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A061B6K2, A0A0K3CFU9, M7XRH4
    Conserved Domains (1) summary
    pfam12767
    Location:35 → 309
    SAGA-Tad1; Transcriptional regulator of RNA polII, SAGA, subunit
Nucleotide Protein
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Gene LinkOut

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