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Ran BP2/NZF zinc finger-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 2745562, updated on 18-Sep-2024

Summary

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Official Full Name
Ran BP2/NZF zinc finger-like superfamily protein
Primary source
TAIR:AT2G26695
Locus tag
AT2G26695
See related
Araport:AT2G26695
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (11364996..11366030)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein Neighboring gene Cytochrome P450 superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197
  3. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_201808.5

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Ran BP2/NZF zinc finger-like superfamily protein
NP_973537.2
  • Ran BP2/NZF zinc finger-like superfamily protein; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT3G15680.1); Has 972 Blast hits to 658 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 112; Plants - 381; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11364996..11366030
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001336081.1 → NP_001324100.1  Ran BP2/NZF zinc finger-like superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VZ50, A0A384LDQ1, A0A654EWE8, Q6ID73
    Conserved Domains (1) summary
    sd00025
    Location:8 → 27
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  2. NM_201808.5 → NP_973537.2  Ran BP2/NZF zinc finger-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973537.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VZ50, A0A384LDQ1, A0A654EWE8, Q6ID73
    Conserved Domains (1) summary
    sd00025
    Location:8 → 27
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
Nucleotide Protein
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