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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001025426.3 → NP_001020597.1 GATOR1 complex protein DEPDC5 isoform 1
See identical proteins and their annotated locations for NP_001020597.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes isoform 1.
- Source sequence(s)
-
AC108773, AC122203
- Consensus CDS
-
CCDS19196.1
- UniProtKB/TrEMBL
-
Q6GQV2
- Related
- ENSMUSP00000085207.5, ENSMUST00000087897.11
- Conserved Domains (2) summary
-
- cd04449
Location:1176 → 1257
- DEP_DEPDC5-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
- pfam12257
Location:101 → 381
- IML1; Vacuolar membrane-associated protein Iml1
-
NM_001170567.2 → NP_001164038.1 GATOR1 complex protein DEPDC5 isoform 3
See identical proteins and their annotated locations for NP_001164038.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, uses an alternate in-frame splice site and includes an alternate exon in the 3' coding region, which results in a frameshift, compared to variant 1. The encoded isoform (3) has a distinct C-terminus and is longer than isoform 1.
- Source sequence(s)
-
AC108773, AC122203
- Consensus CDS
-
CCDS51463.1
- UniProtKB/Swiss-Prot
- E9Q5J2, E9Q5Y0, P61460
- Related
- ENSMUSP00000113862.2, ENSMUST00000119705.8
- Conserved Domains (2) summary
-
- cd04449
Location:1167 → 1248
- DEP_DEPDC5-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
- pfam12257
Location:101 → 381
- IML1; Vacuolar membrane-associated protein Iml1
-
NM_001360014.2 → NP_001346943.1 GATOR1 complex protein DEPDC5 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' and 3' UTRs and lacks three alternate exons compared to variant 1. The resulting isoform (4) is shorter at the N-terminus, has a shorter and distinct C-terminus, and lacks an alternate internal segment compared to isoform 1.
- Source sequence(s)
-
AC108773, AC122203
- Conserved Domains (2) summary
-
- cd04449
Location:976 → 1057
- DEP_DEPDC5-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
- pfam12257
Location:1 → 212
- IML1; Vacuolar membrane-associated protein Iml1
-
NM_001404313.1 → NP_001391242.1 GATOR1 complex protein DEPDC5 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC108773, AC122203
- UniProtKB/Swiss-Prot
- E9Q5J2, E9Q5Y0, P61460
-
NM_001404314.1 → NP_001391243.1 GATOR1 complex protein DEPDC5 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC108773, AC122203
- UniProtKB/TrEMBL
-
Q6GQV2
-
NM_001404315.1 → NP_001391244.1 GATOR1 complex protein DEPDC5 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC108773, AC122203
-
NM_001404316.1 → NP_001391245.1 GATOR1 complex protein DEPDC5 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC108773, AC122203
-
NM_001404317.1 → NP_001391246.1 GATOR1 complex protein DEPDC5 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC108773, AC122203
-
NM_001404318.1 → NP_001391247.1 GATOR1 complex protein DEPDC5 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC108773, AC122203
-
NM_001404319.1 → NP_001391248.1 GATOR1 complex protein DEPDC5 isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC108773, AC122203
-
NM_001404320.1 → NP_001391249.1 GATOR1 complex protein DEPDC5 isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC108773, AC122203
- Related
- ENSMUSP00000113980.2, ENSMUST00000120902.8
-
NM_001404332.1 → NP_001391261.1 GATOR1 complex protein DEPDC5 isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC108773, AC122203
-
NM_001404333.1 → NP_001391262.1 GATOR1 complex protein DEPDC5 isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC108773, AC122203
-
NM_001404334.1 → NP_001391263.1 GATOR1 complex protein DEPDC5 isoform 10
Status: VALIDATED
- Source sequence(s)
-
AC108773, AC122203
-
NM_001404335.1 → NP_001391264.1 GATOR1 complex protein DEPDC5 isoform 11
Status: VALIDATED
- Source sequence(s)
-
AC108773, AC122203
-
NM_001404336.1 → NP_001391265.1 GATOR1 complex protein DEPDC5 isoform 11
Status: VALIDATED
- Source sequence(s)
-
AC108773, AC122203
-
NM_177786.5 → NP_808454.2 GATOR1 complex protein DEPDC5 isoform 2
See identical proteins and their annotated locations for NP_808454.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, 3' UTR, and coding region, compared to variant 1. The encoded isoform (2) has a distinct C-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC108773, AC122203
- Consensus CDS
-
CCDS19197.1
- UniProtKB/TrEMBL
- E9QAT3, Q8BVE2
- Related
- ENSMUSP00000052807.7, ENSMUST00000049780.13
- Conserved Domains (1) summary
-
- pfam12257
Location:107 → 381
- DUF3608; Protein of unknown function (DUF3608)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000071.7 Reference GRCm39 C57BL/6J
- Range
-
33020996..33151581
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006503980.4 → XP_006504043.1 GATOR1 complex protein DEPDC5 isoform X1
See identical proteins and their annotated locations for XP_006504043.1
- Conserved Domains (2) summary
-
- cd04449
Location:1176 → 1257
- DEP_DEPDC5-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
- pfam12257
Location:101 → 381
- IML1; Vacuolar membrane-associated protein Iml1
-
XM_030254553.1 → XP_030110413.1 GATOR1 complex protein DEPDC5 isoform X8
- Conserved Domains (2) summary
-
- cd04449
Location:1007 → 1088
- DEP_DEPDC5-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
- pfam12257
Location:1 → 212
- IML1; Vacuolar membrane-associated protein Iml1
-
XM_030254550.1 → XP_030110410.1 GATOR1 complex protein DEPDC5 isoform X2
- UniProtKB/Swiss-Prot
- E9Q5J2, E9Q5Y0, P61460
- Conserved Domains (2) summary
-
- cd04449
Location:1167 → 1248
- DEP_DEPDC5-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
- pfam12257
Location:101 → 381
- IML1; Vacuolar membrane-associated protein Iml1
-
XM_030254554.2 → XP_030110414.1 GATOR1 complex protein DEPDC5 isoform X8
- Conserved Domains (2) summary
-
- cd04449
Location:1007 → 1088
- DEP_DEPDC5-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
- pfam12257
Location:1 → 212
- IML1; Vacuolar membrane-associated protein Iml1
-
XM_006503978.4 → XP_006504041.1 GATOR1 complex protein DEPDC5 isoform X1
See identical proteins and their annotated locations for XP_006504041.1
- Conserved Domains (2) summary
-
- cd04449
Location:1176 → 1257
- DEP_DEPDC5-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
- pfam12257
Location:101 → 381
- IML1; Vacuolar membrane-associated protein Iml1
-
XM_006503985.4 → XP_006504048.1 GATOR1 complex protein DEPDC5 isoform X3
- Conserved Domains (2) summary
-
- cd04449
Location:1154 → 1235
- DEP_DEPDC5-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
- pfam12257
Location:101 → 381
- IML1; Vacuolar membrane-associated protein Iml1
-
XM_006503984.4 → XP_006504047.1 GATOR1 complex protein DEPDC5 isoform X2
See identical proteins and their annotated locations for XP_006504047.1
- UniProtKB/Swiss-Prot
- E9Q5J2, E9Q5Y0, P61460
- Conserved Domains (2) summary
-
- cd04449
Location:1167 → 1248
- DEP_DEPDC5-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
- pfam12257
Location:101 → 381
- IML1; Vacuolar membrane-associated protein Iml1
-
XM_006503987.4 → XP_006504050.1 GATOR1 complex protein DEPDC5 isoform X5
- UniProtKB/Swiss-Prot
-
P61460
- Conserved Domains (2) summary
-
- cd04449
Location:1145 → 1226
- DEP_DEPDC5-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
- pfam12257
Location:101 → 381
- IML1; Vacuolar membrane-associated protein Iml1
-
XM_006503986.4 → XP_006504049.1 GATOR1 complex protein DEPDC5 isoform X4
- Conserved Domains (2) summary
-
- cd04449
Location:1154 → 1235
- DEP_DEPDC5-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
- pfam12257
Location:101 → 381
- IML1; Vacuolar membrane-associated protein Iml1
-
XM_006503979.4 → XP_006504042.1 GATOR1 complex protein DEPDC5 isoform X1
See identical proteins and their annotated locations for XP_006504042.1
- Conserved Domains (2) summary
-
- cd04449
Location:1176 → 1257
- DEP_DEPDC5-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
- pfam12257
Location:101 → 381
- IML1; Vacuolar membrane-associated protein Iml1
-
XM_006503982.4 → XP_006504045.1 GATOR1 complex protein DEPDC5 isoform X1
See identical proteins and their annotated locations for XP_006504045.1
- Conserved Domains (2) summary
-
- cd04449
Location:1176 → 1257
- DEP_DEPDC5-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
- pfam12257
Location:101 → 381
- IML1; Vacuolar membrane-associated protein Iml1
-
XM_006503988.4 → XP_006504051.1 GATOR1 complex protein DEPDC5 isoform X8
- Conserved Domains (2) summary
-
- cd04449
Location:1007 → 1088
- DEP_DEPDC5-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
- pfam12257
Location:1 → 212
- IML1; Vacuolar membrane-associated protein Iml1