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JAKMIP3 Janus kinase and microtubule interacting protein 3 [ Homo sapiens (human) ]

Gene ID: 282973, updated on 3-Apr-2024

Summary

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Official Symbol
JAKMIP3provided by HGNC
Official Full Name
Janus kinase and microtubule interacting protein 3provided by HGNC
Primary source
HGNC:HGNC:23523
See related
Ensembl:ENSG00000188385 MIM:611198; AllianceGenome:HGNC:23523
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NECC2; Jamip3; C10orf14; C10orf39; bA140A10.5
Summary
Predicted to enable kinase binding activity and microtubule binding activity. Predicted to be located in Golgi apparatus. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in brain (RPKM 2.2), prostate (RPKM 1.0) and 11 other tissues See more
Orthologs
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Genomic context

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See JAKMIP3 in Genome Data Viewer
Location:
10q26.3
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (132036364..132184858)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (132976652..133128086)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (133849868..133998362)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene protein phosphatase 2 regulatory subunit Bdelta Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133785771-133786641 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:133794606-133795530 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2951 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2952 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:133809534-133810520 Neighboring gene uncharacterized LOC124902525 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:133820384-133820908 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:133823019-133823543 Neighboring gene BCL2 interacting protein 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133832958-133833629 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133842692-133843192 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133852590-133853427 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133857569-133858086 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133858087-133858604 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133878227-133878974 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:133881249-133881749 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_11218 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_11222 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_11225 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_11227 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133920928-133921428 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133933330-133934168 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133934169-133935006 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:133951279-133951800 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:133956000-133956846 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:133955152-133955999 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133959409-133959910 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133959911-133960410 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:133960832-133961794 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:133977007-133977706 Neighboring gene JAKMIP3 antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:134001171-134001672 Neighboring gene dihydropyrimidinase like 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4222 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:134056390-134057274 Neighboring gene serine/threonine kinase 32C Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:134067757-134068258 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:134068259-134068758 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:134078043-134078543 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:134096746-134097345 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:134111356-134111519 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2953 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:134122180-134122724 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:134122725-134123267 Neighboring gene Sharpr-MPRA regulatory region 5064 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4223 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:134144980-134145514 Neighboring gene leucine rich repeat containing 27

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Jamip1 (marlin-1) defines a family of proteins interacting with janus kinases and microtubules. Steindler C, et al. J Biol Chem, 2004 Oct 8. PMID 15277531
  2. Identification and characterization of two novel (neuro)endocrine long coiled-coil proteins. Cruz-Garcia D, et al. FEBS Lett, 2007 Jul 10. PMID 17572408
  3. Genome-wide association analysis of blood biomarkers in chronic obstructive pulmonary disease. Kim DK, et al. Am J Respir Crit Care Med, 2012 Dec 15. PMID 23144326, Free PMC Article
  4. Elucidation of the BMI1 interactome identifies novel regulatory roles in glioblastoma. Freire-Benéitez V, et al. NAR Cancer, 2021 Mar. PMID 34316702, Free PMC Article
  5. The DNA sequence and comparative analysis of human chromosome 10. Deloukas P, et al. Nature, 2004 May 27. PMID 15164054

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Observational study of gene-disease association. (HuGE Navigator)
    Title: A scan of chromosome 10 identifies a novel locus showing strong association with late-onset Alzheimer disease.
Submit: New GeneRIF Correction

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

EBI GWAS Catalog

Description
Genome-wide association analysis of blood biomarkers in chronic obstructive pulmonary disease.
EBI GWAS Catalog

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • FLJ37857, FLJ41432

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables kinase binding IEA
Inferred from Electronic Annotation
more info
  
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
janus kinase and microtubule-interacting protein 3
Names
neuroendocrine long coiled-coil 2
neuroendocrine long coiled-coil protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001105521.4 → NP_001098991.1  janus kinase and microtubule-interacting protein 3 isoform e

    See identical proteins and their annotated locations for NP_001098991.1

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS44494.1
    UniProtKB/Swiss-Prot
    A6PW00, Q5VZ66, Q69YM6, Q6ZT29
    UniProtKB/TrEMBL
    A0A590UJS0
    Related
    ENSP00000298622.4, ENST00000298622.9
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 818
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 625
    JAKMIP_CC3; JAKMIP CC3 domain

  2. NM_001323086.2 → NP_001310015.1  janus kinase and microtubule-interacting protein 3 isoform a

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS91379.1
    UniProtKB/TrEMBL
    A0A590UIU4, A0A590UJS0
    Related
    ENSP00000499222.1, ENST00000666210.1
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 831
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 625
    JAKMIP_CC3; JAKMIP CC3 domain

  3. NM_001323087.2 → NP_001310016.1  janus kinase and microtubule-interacting protein 3 isoform b

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS91378.1
    UniProtKB/TrEMBL
    A0A590UJH1, A0A590UJS0
    Related
    ENSP00000508932.1, ENST00000684848.1
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 820
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 625
    JAKMIP_CC3; JAKMIP CC3 domain

  4. NM_001323088.2 → NP_001310017.1  janus kinase and microtubule-interacting protein 3 isoform c

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    UniProtKB/TrEMBL
    A0A590UJS0

  5. NM_001323089.2 → NP_001310018.1  janus kinase and microtubule-interacting protein 3 isoform d

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS91381.1
    UniProtKB/TrEMBL
    A0A590UJT1, A0A590UK42
    Related
    ENSP00000499560.1, ENST00000657318.1

  6. NM_001323090.2 → NP_001310019.1  janus kinase and microtubule-interacting protein 3 isoform e

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6) and variant 5 both encode the same isoform (e).
    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS44494.1
    UniProtKB/Swiss-Prot
    A6PW00, Q5VZ66, Q69YM6, Q6ZT29
    UniProtKB/TrEMBL
    A0A590UJS0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 818
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 625
    JAKMIP_CC3; JAKMIP CC3 domain

  7. NM_001392039.1 → NP_001378968.1  janus kinase and microtubule-interacting protein 3 isoform f

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    UniProtKB/TrEMBL
    A0A590UJS0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 835
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:428 → 623
    JAKMIP_CC3; JAKMIP CC3 domain

  8. NM_001392040.1 → NP_001378969.1  janus kinase and microtubule-interacting protein 3 isoform g

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    UniProtKB/TrEMBL
    A0A590UJS0
    Conserved Domains (2) summary
    TIGR02169
    Location:45 → 830
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    pfam16034
    Location:430 → 625
    JAKMIP_CC3; JAKMIP CC3 domain

  9. NM_001392041.1 → NP_001378970.1  janus kinase and microtubule-interacting protein 3 isoform b

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS91378.1
    UniProtKB/TrEMBL
    A0A590UJH1, A0A590UJS0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 820
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 625
    JAKMIP_CC3; JAKMIP CC3 domain

  10. NM_001392042.1 → NP_001378971.1  janus kinase and microtubule-interacting protein 3 isoform b

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS91378.1
    UniProtKB/TrEMBL
    A0A590UJH1, A0A590UJS0
    Related
    ENSP00000499416.1, ENST00000666974.1
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 820
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 625
    JAKMIP_CC3; JAKMIP CC3 domain

  11. NM_001392043.1 → NP_001378972.1  janus kinase and microtubule-interacting protein 3 isoform e

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS44494.1
    UniProtKB/Swiss-Prot
    A6PW00, Q5VZ66, Q69YM6, Q6ZT29
    UniProtKB/TrEMBL
    A0A590UJS0
    Related
    ENSP00000499753.1, ENST00000668452.1
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 818
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 625
    JAKMIP_CC3; JAKMIP CC3 domain

  12. NM_001392044.1 → NP_001378973.1  janus kinase and microtubule-interacting protein 3 isoform e

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS44494.1
    UniProtKB/Swiss-Prot
    A6PW00, Q5VZ66, Q69YM6, Q6ZT29
    UniProtKB/TrEMBL
    A0A590UJS0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 818
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 625
    JAKMIP_CC3; JAKMIP CC3 domain

  13. NM_001392045.1 → NP_001378974.1  janus kinase and microtubule-interacting protein 3 isoform e

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS44494.1
    UniProtKB/Swiss-Prot
    A6PW00, Q5VZ66, Q69YM6, Q6ZT29
    UniProtKB/TrEMBL
    A0A590UJS0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 818
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 625
    JAKMIP_CC3; JAKMIP CC3 domain

  14. NM_001392046.1 → NP_001378975.1  janus kinase and microtubule-interacting protein 3 isoform e

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS44494.1
    UniProtKB/Swiss-Prot
    A6PW00, Q5VZ66, Q69YM6, Q6ZT29
    UniProtKB/TrEMBL
    A0A590UJS0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 818
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 625
    JAKMIP_CC3; JAKMIP CC3 domain

  15. NM_001392047.1 → NP_001378976.1  janus kinase and microtubule-interacting protein 3 isoform e

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS44494.1
    UniProtKB/Swiss-Prot
    A6PW00, Q5VZ66, Q69YM6, Q6ZT29
    UniProtKB/TrEMBL
    A0A590UJS0
    Related
    ENSP00000499375.1, ENST00000664697.1
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 818
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 625
    JAKMIP_CC3; JAKMIP CC3 domain

  16. NM_001392048.1 → NP_001378977.1  janus kinase and microtubule-interacting protein 3 isoform h

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    UniProtKB/TrEMBL
    A0A590UJS0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 818
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 623
    JAKMIP_CC3; JAKMIP CC3 domain

  17. NM_001392049.1 → NP_001378978.1  janus kinase and microtubule-interacting protein 3 isoform h

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    UniProtKB/TrEMBL
    A0A590UJS0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 818
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 623
    JAKMIP_CC3; JAKMIP CC3 domain

  18. NM_001392050.1 → NP_001378979.1  janus kinase and microtubule-interacting protein 3 isoform i

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    UniProtKB/TrEMBL
    A0A590UJS0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 816
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:428 → 621
    JAKMIP_CC3; JAKMIP CC3 domain

  19. NM_001392051.1 → NP_001378980.1  janus kinase and microtubule-interacting protein 3 isoform j

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    UniProtKB/TrEMBL
    A0A590UJS0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 815
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:427 → 622
    JAKMIP_CC3; JAKMIP CC3 domain

  20. NM_001392052.1 → NP_001378981.1  janus kinase and microtubule-interacting protein 3 isoform k

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS91380.1
    UniProtKB/TrEMBL
    A0A590UJ61, A0A590UJS0
    Related
    ENSP00000499285.1, ENST00000653512.1
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 809
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:428 → 623
    JAKMIP_CC3; JAKMIP CC3 domain

  21. NM_001392053.1 → NP_001378982.1  janus kinase and microtubule-interacting protein 3 isoform l

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    UniProtKB/TrEMBL
    A0A590UK42
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 765
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:358 → 551
    JAKMIP_CC3; JAKMIP CC3 domain

  22. NM_001392054.1 → NP_001378983.1  janus kinase and microtubule-interacting protein 3 isoform m

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    UniProtKB/TrEMBL
    A0A590UK42
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 748
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:358 → 553
    JAKMIP_CC3; JAKMIP CC3 domain

  23. NM_001392055.1 → NP_001378984.1  janus kinase and microtubule-interacting protein 3 isoform n

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS91382.1
    UniProtKB/TrEMBL
    A0A590UK42, A0A590UK98
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 746
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:358 → 553
    JAKMIP_CC3; JAKMIP CC3 domain

  24. NM_001392056.1 → NP_001378985.1  janus kinase and microtubule-interacting protein 3 isoform n

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS91382.1
    UniProtKB/TrEMBL
    A0A590UK42, A0A590UK98
    Related
    ENSP00000499788.1, ENST00000659050.1
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 746
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:358 → 553
    JAKMIP_CC3; JAKMIP CC3 domain

  25. NM_001392057.1 → NP_001378986.1  janus kinase and microtubule-interacting protein 3 isoform n

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS91382.1
    UniProtKB/TrEMBL
    A0A590UK42, A0A590UK98
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 746
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:358 → 553
    JAKMIP_CC3; JAKMIP CC3 domain

  26. NM_001392058.1 → NP_001378987.1  janus kinase and microtubule-interacting protein 3 isoform o

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    UniProtKB/TrEMBL
    A0A590UK42
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 745
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:355 → 550
    JAKMIP_CC3; JAKMIP CC3 domain

  27. NM_001392059.1 → NP_001378988.1  janus kinase and microtubule-interacting protein 3 isoform p

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS91383.1
    UniProtKB/TrEMBL
    A0A590UJC8, A0A590UK42
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 744
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:356 → 551
    JAKMIP_CC3; JAKMIP CC3 domain

  28. NM_001392060.1 → NP_001378989.1  janus kinase and microtubule-interacting protein 3 isoform p

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS91383.1
    UniProtKB/TrEMBL
    A0A590UJC8, A0A590UK42
    Related
    ENSP00000499227.1, ENST00000653623.1
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 744
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:356 → 551
    JAKMIP_CC3; JAKMIP CC3 domain

  29. NM_001392061.1 → NP_001378990.1  janus kinase and microtubule-interacting protein 3 isoform q

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS91385.1
    UniProtKB/TrEMBL
    A0A590UK11, A0A590UK42
    Related
    ENSP00000499650.1, ENST00000661339.1
    Conserved Domains (2) summary
    TIGR02168
    Location:55 → 734
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:347 → 542
    JAKMIP_CC3; JAKMIP CC3 domain

  30. NM_001392062.1 → NP_001378991.1  janus kinase and microtubule-interacting protein 3 isoform q

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS91385.1
    UniProtKB/TrEMBL
    A0A590UK11, A0A590UK42
    Related
    ENSP00000499348.1, ENST00000658847.1
    Conserved Domains (2) summary
    TIGR02168
    Location:55 → 734
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:347 → 542
    JAKMIP_CC3; JAKMIP CC3 domain

  31. NM_001392063.1 → NP_001378992.1  janus kinase and microtubule-interacting protein 3 isoform r

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    UniProtKB/TrEMBL
    A0A590UK42
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 732
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:358 → 553
    JAKMIP_CC3; JAKMIP CC3 domain

  32. NM_001392064.1 → NP_001378993.1  janus kinase and microtubule-interacting protein 3 isoform r

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    UniProtKB/TrEMBL
    A0A590UK42
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 732
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:358 → 553
    JAKMIP_CC3; JAKMIP CC3 domain

  33. NM_001392065.1 → NP_001378994.1  janus kinase and microtubule-interacting protein 3 isoform s

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS91384.1
    UniProtKB/TrEMBL
    A0A590UJG1, A0A590UK42
    Related
    ENSP00000499432.1, ENST00000669493.1
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 722
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:356 → 551
    JAKMIP_CC3; JAKMIP CC3 domain

  34. NM_001392066.1 → NP_001378995.1  janus kinase and microtubule-interacting protein 3 isoform t

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    UniProtKB/TrEMBL
    A0A590UK42
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 719
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:358 → 524
    JAKMIP_CC3; JAKMIP CC3 domain

  35. NM_001392067.1 → NP_001378996.1  janus kinase and microtubule-interacting protein 3 isoform u

    Status: VALIDATED

    Source sequence(s)
    AL162274, AL512622
    Consensus CDS
    CCDS91386.1
    UniProtKB/TrEMBL
    A0A590UJF4, A0A590UK42
    Related
    ENSP00000499400.1, ENST00000670443.1
    Conserved Domains (2) summary
    TIGR02168
    Location:1 → 660
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:273 → 468
    JAKMIP_CC3; JAKMIP CC3 domain

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    132036364..132184858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011539676.3 → XP_011537978.1  janus kinase and microtubule-interacting protein 3 isoform X1

    See identical proteins and their annotated locations for XP_011537978.1

    UniProtKB/TrEMBL
    A0A590UIU4, A0A590UJS0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 831
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 625
    JAKMIP_CC3; JAKMIP CC3 domain

  2. XM_047425106.1 → XP_047281062.1  janus kinase and microtubule-interacting protein 3 isoform X2

  3. XM_047425107.1 → XP_047281063.1  janus kinase and microtubule-interacting protein 3 isoform X3

  4. XM_047425109.1 → XP_047281065.1  janus kinase and microtubule-interacting protein 3 isoform X5

  5. XM_017016095.3 → XP_016871584.1  janus kinase and microtubule-interacting protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A590UIU4, A0A590UJS0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 831
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 625
    JAKMIP_CC3; JAKMIP CC3 domain

  6. XM_005252674.6 → XP_005252731.1  janus kinase and microtubule-interacting protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A590UJS0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 830
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:430 → 625
    JAKMIP_CC3; JAKMIP CC3 domain

  7. XM_011539682.4 → XP_011537984.1  janus kinase and microtubule-interacting protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A590UJS0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 759
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:358 → 553
    JAKMIP_CC3; JAKMIP CC3 domain

  8. XM_047425110.1 → XP_047281066.1  janus kinase and microtubule-interacting protein 3 isoform X6

  9. XM_047425108.1 → XP_047281064.1  janus kinase and microtubule-interacting protein 3 isoform X4

  10. XM_005252676.6 → XP_005252733.1  janus kinase and microtubule-interacting protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A590UJS0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 757
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam16034
    Location:356 → 551
    JAKMIP_CC3; JAKMIP CC3 domain

  11. XM_047425111.1 → XP_047281067.1  janus kinase and microtubule-interacting protein 3 isoform X7

  12. XM_017016098.3 → XP_016871587.1  janus kinase and microtubule-interacting protein 3 isoform X8

  13. XM_017016099.3 → XP_016871588.1  janus kinase and microtubule-interacting protein 3 isoform X9

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    132976652..133128086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054365628.1 → XP_054221603.1  janus kinase and microtubule-interacting protein 3 isoform X1

  2. XM_054365631.1 → XP_054221606.1  janus kinase and microtubule-interacting protein 3 isoform X2

  3. XM_054365633.1 → XP_054221608.1  janus kinase and microtubule-interacting protein 3 isoform X3

  4. XM_054365636.1 → XP_054221611.1  janus kinase and microtubule-interacting protein 3 isoform X5

  5. XM_054365629.1 → XP_054221604.1  janus kinase and microtubule-interacting protein 3 isoform X1

  6. XM_054365630.1 → XP_054221605.1  janus kinase and microtubule-interacting protein 3 isoform X2

  7. XM_054365632.1 → XP_054221607.1  janus kinase and microtubule-interacting protein 3 isoform X3

  8. XM_054365637.1 → XP_054221612.1  janus kinase and microtubule-interacting protein 3 isoform X6

  9. XM_054365634.1 → XP_054221609.1  janus kinase and microtubule-interacting protein 3 isoform X4

  10. XM_054365635.1 → XP_054221610.1  janus kinase and microtubule-interacting protein 3 isoform X5

  11. XM_054365638.1 → XP_054221613.1  janus kinase and microtubule-interacting protein 3 isoform X7

  12. XM_054365639.1 → XP_054221614.1  janus kinase and microtubule-interacting protein 3 isoform X9

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001104947.1: Suppressed sequence

    Description
    NM_001104947.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.

  2. NM_194303.1: Suppressed sequence

    Description
    NM_194303.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5VZ66.2 GenPept UniProtKB/Swiss-Prot:Q5VZ66

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