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DGAT2-DT DGAT2 divergent transcript [ Homo sapiens (human) ]

Gene ID: 283214, updated on 17-Sep-2024

Summary

Official Symbol
DGAT2-DTprovided by HGNC
Official Full Name
DGAT2 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:27451
See related
Ensembl:ENSG00000247867 AllianceGenome:HGNC:27451
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See DGAT2-DT in Genome Data Viewer
Location:
11q13.5
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (75758455..75768647, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (75687871..75698370, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (75469500..75479692, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105369392 Neighboring gene monoacylglycerol O-acyltransferase 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3773 Neighboring gene RNA, 7SL, cytoplasmic 786, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5275 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:75479126-75479626 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3774 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3775 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5276 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5277 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:75487905-75488193 Neighboring gene diacylglycerol O-acyltransferase 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:75492457-75493023 Neighboring gene Sharpr-MPRA regulatory region 10576 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3776 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5278 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:75524366-75525565 Neighboring gene Sharpr-MPRA regulatory region 8 Neighboring gene UVRAG divergent transcript

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046090.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP001922, BC039351
    Related
    ENST00000499390.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    75758455..75768647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    75687871..75698370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)