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TTC3P1 tetratricopeptide repeat domain 3 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 286495, updated on 10-Oct-2023

Summary

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Official Symbol
TTC3P1provided by HGNC
Official Full Name
tetratricopeptide repeat domain 3 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:23318
See related
AllianceGenome:HGNC:23318
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TTC3L; RNF105L
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Genomic context

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See TTC3P1 in Genome Data Viewer
Location:
Xq13.3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (75740538..75743079, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (74174210..74176751, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (74960373..74962914, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985664 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:74780229-74780730 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:74780731-74781230 Neighboring gene PEST containing nuclear protein pseudogene 4 Neighboring gene BRAF pseudogene 1 Neighboring gene MAGE family member E2 Neighboring gene Sharpr-MPRA regulatory region 1365 Neighboring gene secretion associated Ras related GTPase 1A pseudogene 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_030737.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK304575, AL391495, AY672106

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    75740538..75743079 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    74174210..74176751 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_007179.1: Suppressed sequence

    Description
    NG_007179.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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