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Ppp1r27 protein phosphatase 1, regulatory subunit 27 [ Rattus norvegicus (Norway rat) ]

Gene ID: 287881, updated on 17-Aug-2024

Summary

Official Symbol
Ppp1r27provided by RGD
Official Full Name
protein phosphatase 1, regulatory subunit 27provided by RGD
Primary source
RGD:1308861
See related
EnsemblRapid:ENSRNOG00000036690 AllianceGenome:RGD:1308861
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Dysfip1; RGD1308861
Summary
Predicted to enable phosphatase binding activity. Orthologous to human PPP1R27 (protein phosphatase 1 regulatory subunit 27). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward (RPKM 1526.2) See more
Orthologs
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Genomic context

See Ppp1r27 in Genome Data Viewer
Location:
10q32.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (106326691..106327860, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (105828364..105829533, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (109727850..109729019, complement)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103693493 Neighboring gene glucagon receptor Neighboring gene MAPK regulated co-repressor interacting protein 1 Neighboring gene dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 like 1 Neighboring gene prolyl 4-hydroxylase subunit beta Neighboring gene H/ACA ribonucleoprotein complex subunit 3 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
protein phosphatase 1 regulatory subunit 27
Names
dysferlin-interacting protein 1
myosin-binding subunit 85

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001105858.1NP_001099328.1  protein phosphatase 1 regulatory subunit 27

    See identical proteins and their annotated locations for NP_001099328.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473948
    UniProtKB/TrEMBL
    A6HLE7, D3ZXG0
    Related
    ENSRNOP00000051842.2, ENSRNOT00000054959.4
    Conserved Domains (2) summary
    sd00045
    Location:6394
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:38127
    Ank_2; Ankyrin repeats (3 copies)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    106326691..106327860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)