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Mtfp1 mitochondrial fission process 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 289745, updated on 2-Nov-2024

Summary

Official Symbol
Mtfp1provided by RGD
Official Full Name
mitochondrial fission process 1provided by RGD
Primary source
RGD:1359705
See related
EnsemblRapid:ENSRNOG00000004640 AllianceGenome:RGD:1359705
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Mtp18
Summary
Involved in response to muscle activity. Predicted to be located in mitochondrial inner membrane. Predicted to be active in mitochondrion. Orthologous to human MTFP1 (mitochondrial fission process 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Heart (RPKM 159.3), Muscle (RPKM 108.2) and 7 other tissues See more
Orthologs
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Genomic context

See Mtfp1 in Genome Data Viewer
Location:
14q21
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (83192013..83195853, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (78968434..78972274, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (84330223..84334063, complement)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L9, pseudogene 25 Neighboring gene SEC14-like lipid binding 3 Neighboring gene uncharacterized LOC102549281 Neighboring gene SEC14-like lipid binding 2 Neighboring gene ring finger protein 215 Neighboring gene coiled-coil domain containing 157

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC94604

Gene Ontology Provided by RGD

Process Evidence Code Pubs
acts_upstream_of_or_within apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in mitochondrial fission IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitochondrial fission ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within mitochondrion organization ISO
Inferred from Sequence Orthology
more info
 
involved_in response to muscle activity IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane ISO
Inferred from Sequence Orthology
more info
 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
PubMed 

General protein information

Preferred Names
mitochondrial fission process protein 1
Names
mitochondrial 18 kDa protein
mitochondrial protein 18 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006960.1NP_001006961.1  mitochondrial fission process protein 1

    See identical proteins and their annotated locations for NP_001006961.1

    Status: PROVISIONAL

    Source sequence(s)
    BC083713
    UniProtKB/TrEMBL
    A6IKE5, A6IKE6, F7EL31, Q5XIG9
    Related
    ENSRNOP00000006160.3, ENSRNOT00000006160.8
    Conserved Domains (1) summary
    pfam10558
    Location:20146
    MTP18; Mitochondrial 18 KDa protein (MTP18)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    83192013..83195853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)