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Ces1dl1 carboxylesterase 1D like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 291863, updated on 2-Nov-2024

Summary

Official Symbol
Ces1dl1provided by RGD
Official Full Name
carboxylesterase 1D like 1provided by RGD
Primary source
RGD:1359640
See related
EnsemblRapid:ENSRNOG00000015519 AllianceGenome:RGD:1359640
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Enables retinyl-palmitate esterase activity. Predicted to be involved in acylglycerol catabolic process. Located in intracellular membrane-bounded organelle. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See Ces1dl1 in Genome Data Viewer
Location:
19q11
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 19 NC_086037.1 (38444294..38476011)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 19 NC_051354.1 (22560685..22592355)

Chromosome 19 - NC_086037.1Genomic Context describing neighboring genes Neighboring gene discs large MAGUK scaffold protein 5 like 16 Neighboring gene carboxylesterase 1C-like Neighboring gene uncharacterized LOC120098583 Neighboring gene carboxylesterase 1E-like

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables all-trans-retinyl-palmitate hydrolase, all-trans-retinol forming activity IEA
Inferred from Electronic Annotation
more info
 
enables carboxylic ester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables fatty-acyl-ethyl-ester synthase activity IEA
Inferred from Electronic Annotation
more info
 
enables retinyl-palmitate esterase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables sterol ester esterase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables triacylglycerol lipase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in acylglycerol catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in retinoid metabolic process TAS
Traceable Author Statement
more info
PubMed 
involved_in retinol metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytosol ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum lumen ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in intracellular membrane-bounded organelle IDA
Inferred from Direct Assay
more info
PubMed 
located_in lipid droplet ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
carboxylesterase 1D like 1
Names
carboxylesterase-like
NP_001013911.1
XP_038953488.1
XP_038953489.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013889.1NP_001013911.1  carboxylesterase 1D like 1 precursor

    See identical proteins and their annotated locations for NP_001013911.1

    Status: PROVISIONAL

    Source sequence(s)
    BC078681
    UniProtKB/Swiss-Prot
    P16303, Q64574, Q6P785, Q91YG2, Q9QUX7, Q9R135
    UniProtKB/TrEMBL
    A0A9K3Y765, G3V822, Q68G49
    Related
    ENSRNOP00000021812.7, ENSRNOT00000021812.8
    Conserved Domains (1) summary
    pfam00135
    Location:24545
    COesterase; Carboxylesterase family

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086037.1 Reference GRCr8

    Range
    38444294..38476011
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039097561.2XP_038953489.1  carboxylesterase 1D like 1 isoform X2

    UniProtKB/Swiss-Prot
    P16303, Q64574, Q6P785, Q91YG2, Q9QUX7, Q9R135
    Related
    ENSRNOP00000020775.7, ENSRNOT00000020775.7
    Conserved Domains (1) summary
    pfam00135
    Location:22501
    COesterase; Carboxylesterase family
  2. XM_039097560.2XP_038953488.1  carboxylesterase 1D like 1 isoform X1

    UniProtKB/Swiss-Prot
    P16303, Q64574, Q6P785, Q91YG2, Q9QUX7, Q9R135
    Related
    ENSRNOP00000108768.1, ENSRNOT00000121458.1
    Conserved Domains (1) summary
    pfam00135
    Location:22532
    COesterase; Carboxylesterase family

RNA

  1. XR_005496625.2 RNA Sequence