U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Leng1 leukocyte receptor cluster member 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 292535, updated on 17-Aug-2024

Summary

Official Symbol
Leng1provided by RGD
Official Full Name
leukocyte receptor cluster member 1provided by RGD
Primary source
RGD:1307933
See related
EnsemblRapid:ENSRNOG00000061893 AllianceGenome:RGD:1307933
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human LENG1 (leukocyte receptor cluster member 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Heart (RPKM 53.4), Thymus (RPKM 41.9) and 9 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Leng1 in Genome Data Viewer
Location:
1q12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (74467343..74472275)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (65551983..65556915)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (64126882..64131814)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene membrane bound O-acyltransferase domain containing 7 Neighboring gene transmembrane channel-like 4 Neighboring gene CCR4-NOT transcription complex, subunit 3 Neighboring gene microRNA 3572 Neighboring gene pre-mRNA processing factor 31

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
leukocyte receptor cluster member 1
Names
leukocyte receptor cluster (LRC) member 1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001106218.1NP_001099688.1  leukocyte receptor cluster member 1

    See identical proteins and their annotated locations for NP_001099688.1

    Status: PROVISIONAL

    Source sequence(s)
    CH474101
    UniProtKB/TrEMBL
    A6KS24, D3ZER8
    Related
    ENSRNOP00000075238.1, ENSRNOT00000091742.3
    Conserved Domains (1) summary
    smart01083
    Location:844
    Cir_N; N-terminal domain of CBF1 interacting co-repressor CIR

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    74467343..74472275
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)