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rgpB Arg-gingipain RgpB [ Porphyromonas gingivalis ATCC 33277 ]

Gene ID: 29256649, updated on 24-Dec-2023

Summary

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Gene symbol
rgpB
Gene description
Arg-gingipain RgpB
Locus tag
PGN_RS07000
Gene type
protein coding
Organism
Porphyromonas gingivalis ATCC 33277 (strain: ATCC 33277, type-material: type strain of Bacteroides gingivalis)
Lineage
Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas
Old locus tag
PGN_1466
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Genomic context

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Sequence:
NC_010729.1 (1641155..1643365, complement)

NC_010729.1Genomic Context describing neighboring genes Neighboring gene decaprenyl-phosphate phosphoribosyltransferase Neighboring gene rRNA maturation RNase YbeY Neighboring gene HAD-IB family hydrolase Neighboring gene lipoyl synthase Neighboring gene S9 family peptidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010729.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
Arg-gingipain RgpB
WP_012458292.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010729.1 Reference assembly

    Range
    1641155..1643365 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012458292.1 Arg-gingipain RgpB [Porphyromonas gingivalis]

    See identical proteins and their annotated locations for WP_012458292.1

    UniProtKB/Swiss-Prot
    B2RKU0
    UniProtKB/TrEMBL
    Q51844
    Conserved Domains (4) summary
    cd10913
    Location:231 → 575
    Peptidase_C25_N_gingipain; gingipain subgroup of the Peptidase C25 family N-terminal domain
    TIGR04183
    Location:682 → 736
    Por_Secre_tail; Por secretion system C-terminal sorting domain
    pfam03785
    Location:580 → 654
    Peptidase_C25_C; Peptidase family C25, C terminal ig-like domain
    pfam08126
    Location:25 → 222
    Propeptide_C25; Propeptide_C25
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B2RKU0.1

Gene LinkOut

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