Rps4x-ps9 ribosomal protein S4, X-linked, pseudogene 9 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Rps4x-ps9provided by RGD
Official Full Name: ribosomal protein S4, X-linked, pseudogene 9provided by RGD
Primary source: RGD:3600
See related: EnsemblRapid:ENSRNOG00000029574 AllianceGenome:RGD:3600
Gene type: pseudo
RefSeq status: INFERRED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Rps4x
Summary: This locus is likely a processed pseudogene of Rps4X (GeneID: 100362640). Note that it contains the identical nucleotide sequence as that of the coding region of the parental gene. Consistent with this locus being a processed pseudogene, it contains only exonic sequences relative to the parental gene, and has a polyA region in the genome at the 3' end of the gene. [provided by RefSeq, Apr 2015]
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Genomic context

Location:: 4q21

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	4	NC_086022.1 (38724595..38725511, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	4	NC_051339.1 (37758373..37759289, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	4	NC_005103.4 (35729619..35730535, complement)

Chromosome 4 - NC_086022.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

GDB:192505 (e-PCR)
- UniSTS:99180

GDB:194747 (e-PCR)
- UniSTS:155803

GDB:194748 (e-PCR)
- UniSTS:155804

Rps4x (e-PCR), detects polymorphism
- UniSTS:144361

Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables rRNA binding	IEA Inferred from Electronic Annotation more info
enables structural constituent of ribosome	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info
involved_in translation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info
located_in ribosome	IEA Inferred from Electronic Annotation more info

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.