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Mab21l3 mab-21 like 3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 295326, updated on 10-Jul-2024

Summary

Official Symbol
Mab21l3provided by RGD
Official Full Name
mab-21 like 3provided by RGD
Primary source
RGD:1308694
See related
EnsemblRapid:ENSRNOG00000016044 AllianceGenome:RGD:1308694
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1308694
Summary
Orthologous to human MAB21L3 (mab-21 like 3). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Kidney (RPKM 90.1), Uterus (RPKM 55.0) and 2 other tissues See more
Orthologs
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Genomic context

See Mab21l3 in Genome Data Viewer
Location:
2q34
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (191937451..191960204, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (189248895..189271652, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (204231936..204269235, complement)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103691652 Neighboring gene ATPase Na+/K+ transporting subunit alpha 1 Neighboring gene solute carrier family 22, member 15 Neighboring gene nescient helix loop helix 2

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001106456.1NP_001099926.1  protein mab-21-like 3

    See identical proteins and their annotated locations for NP_001099926.1

    Status: PROVISIONAL

    Source sequence(s)
    CH474015
    UniProtKB/TrEMBL
    A6K3H9, D4AE70
    Related
    ENSRNOP00000021488.4, ENSRNOT00000021487.7
    Conserved Domains (1) summary
    pfam03281
    Location:125418
    Mab-21; Mab-21 protein

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    191937451..191960204 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)