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Adgrf2 adhesion G protein-coupled receptor F2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 301269, updated on 2-Nov-2024

Summary

Official Symbol
Adgrf2provided by RGD
Official Full Name
adhesion G protein-coupled receptor F2provided by RGD
Primary source
RGD:1306718
See related
AllianceGenome:RGD:1306718
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Gpr111; Gpr115
Summary
Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Orthologous to human ADGRF2P (adhesion G protein-coupled receptor F2, pseudogene). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Lung (RPKM 2.5), Kidney (RPKM 2.3) and 4 other tissues See more
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Genomic context

See Adgrf2 in Genome Data Viewer
Location:
9q13
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (25735607..25745962)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (18238389..18248745)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (20898943..20948284)

Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene TNF receptor superfamily member 21 Neighboring gene CD2-associated protein Neighboring gene adhesion G protein-coupled receptor F4 Neighboring gene transfer RNA threonine (anticodon AGU) 32 Neighboring gene opsin 5

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
adhesion G-protein coupled receptor F2
Names
G protein-coupled receptor 115
G-protein coupled receptor 111
G-protein coupled receptor PGR20
probable G-protein coupled receptor 111

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086027.1 Reference GRCr8

    Range
    25735607..25745962
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017596752.3XP_017452241.2  adhesion G-protein coupled receptor F2

    UniProtKB/TrEMBL
    A6JJ49
    Conserved Domains (3) summary
    cd14964
    Location:384409
    7tm_GPCRs; TM helix 1 [structural motif]
    cl02559
    Location:330377
    GPS; GPCR proteolysis site, GPS, motif
    cl28897
    Location:382628
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily