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SAICODRAFT_78195 WD40 repeat-like protein [ Saitoella complicata NRRL Y-17804 ]

Gene ID: 30187950, updated on 14-Dec-2023

Summary

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Gene symbol
SAICODRAFT_78195
Gene description
WD40 repeat-like protein
Locus tag
SAICODRAFT_78195
Gene type
protein coding
RNA name
WD40 repeat-like protein
RefSeq status
PROVISIONAL
Organism
Saitoella complicata NRRL Y-17804 (strain: NRRL Y-17804, type-material: culture from type material of Saitoella complicata)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Taphrinomycotina incertae sedis; Saitoella
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Genomic context

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See SAICODRAFT_78195 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_017566998.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene mitochondrial matrix iron-sulfur protein Neighboring gene deoxythymidylate kinase-like protein Neighboring gene eukaryotic translation initiation factor 4E Neighboring gene glycolipid 2-alpha-mannosyltransferase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017566998.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of biotechnologically important yeasts. Riley R, et al. Proc Natl Acad Sci U S A, 2016 Aug 30. PMID 27535936, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD40 repeat-like protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_017566998.1 Reference assembly

    Range
    54180..55627
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019171103.1 → XP_019025159.1  WD40 repeat-like protein [Saitoella complicata NRRL Y-17804]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0E9NI75
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
ODQ54046.1

Gene LinkOut

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Molecular Biology Databases