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POLY polyprotein [ Hepacivirus vittatae ]

Gene ID: 30305952, updated on 23-Jun-2023

Summary

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Gene symbol
POLY
Gene description
polyprotein
Locus tag
BOW84_gp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Hepacivirus vittatae (isolate: PDB-112, nat-host: Hipposideros vittatus)
Lineage
Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Hepacivirus
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Genomic context

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Sequence:
NC_031916.1 (174..8879)

NC_031916.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_031916.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bats are a major natural reservoir for hepaciviruses and pegiviruses. Quan PL, et al. Proc Natl Acad Sci U S A, 2013 May 14. PMID 23610427, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
polyprotein
Names
core protein C
envelope protein E1
envelope protein E2
protein p7
nonstructural protein NS2
protease-helicase NS3
nonstructural protein NS4A
nonstructural protein NS4B
nonstructural protein NS5A
RNA-dependent RNA polymerase NS5B

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_031916.1 Reference assembly

    Range
    174..8879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009322132.1 polyprotein [Hepacivirus vittatae]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M9ZRW5

  2. YP_009679014.1 core protein C

    Conserved Domains (1) summary
    pfam01542
    Location:89 → 159
    HCV_core; Hepatitis C virus core protein

  3. YP_009679015.1 envelope protein E1

    Conserved Domains (1) summary
    pfam01539
    Location:15 → 197
    HCV_env; Hepatitis C virus envelope glycoprotein E1

  4. YP_009679016.1 envelope protein E2

  5. YP_009679017.1 protein p7

  6. YP_009679018.1 nonstructural protein NS2

    Conserved Domains (1) summary
    pfam01538
    Location:95 → 193
    HCV_NS2; Hepatitis C virus non-structural protein NS2

  7. YP_009679019.1 protease-helicase NS3

    Conserved Domains (3) summary
    cl38915
    Location:337 → 478
    DEAD-like_helicase_C; C-terminal helicase domain of the DEAD-like helicases
    pfam02907
    Location:31 → 173
    Peptidase_S29; Hepatitis C virus NS3 protease
    cl28899
    Location:201 → 341
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  8. YP_009679020.1 nonstructural protein NS4A

  9. YP_009679021.1 nonstructural protein NS4B

  10. YP_009679022.1 nonstructural protein NS5A

  11. YP_009679023.1 RNA-dependent RNA polymerase NS5B

Protein Accession Links
GenPept Link UniProtKB Link
AGK41007.1

Gene LinkOut

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