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Mpo myeloperoxidase [ Rattus norvegicus (Norway rat) ]

Gene ID: 303413, updated on 2-Nov-2024

Summary

Official Symbol
Mpoprovided by RGD
Official Full Name
myeloperoxidaseprovided by RGD
Primary source
RGD:1592081
See related
EnsemblRapid:ENSRNOG00000008310 AllianceGenome:RGD:1592081
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Enables peroxidase activity. Involved in several processes, including response to food; response to gold nanoparticle; and response to lipopolysaccharide. Located in extracellular space. Used to study acute kidney failure. Biomarker of chronic obstructive pulmonary disease; cystitis; and renovascular hypertension. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease 1; cystic fibrosis; kidney failure (multiple); liver disease (multiple); and lung disease (multiple). Orthologous to human MPO (myeloperoxidase). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Spleen (RPKM 105.3), Thymus (RPKM 100.8) and 4 other tissues See more
Orthologs
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Genomic context

See Mpo in Genome Data Viewer
Location:
10q26
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (73092124..73102057)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (72594883..72608862)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (75087892..75098260)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134480847 Neighboring gene SPT4 homolog, DSIF elongation factor subunit Neighboring gene TSPO associated protein 1 Neighboring gene microRNA 142 Neighboring gene lactoperoxidase Neighboring gene MKS transition zone complex subunit 1 Neighboring gene eosinophil peroxidase

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 
enables heparin binding ISO
Inferred from Sequence Orthology
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables peroxidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables peroxidase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables peroxidase activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
NOT acts_upstream_of_or_within defense response to Gram-positive bacterium ISO
Inferred from Sequence Orthology
more info
 
involved_in defense response to bacterium IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within defense response to fungus ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within hydrogen peroxide catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in hydrogen peroxide catabolic process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within hypochlorous acid biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
involved_in low-density lipoprotein particle remodeling ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within removal of superoxide radicals ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within respiratory burst involved in defense response ISO
Inferred from Sequence Orthology
more info
 
involved_in response to food IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to gold nanoparticle IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to lipopolysaccharide IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to mechanical stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to oxidative stress IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within response to yeast ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in azurophil granule ISO
Inferred from Sequence Orthology
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 
located_in intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in secretory granule ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
myeloperoxidase
NP_001388741.1
XP_006247157.1
XP_006247158.1
XP_063125167.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001401812.1NP_001388741.1  myeloperoxidase precursor

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000010

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    73092124..73102057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006247096.5XP_006247158.1  myeloperoxidase isoform X1

    See identical proteins and their annotated locations for XP_006247158.1

    UniProtKB/TrEMBL
    A0A0G2K1A2
    Related
    ENSRNOP00000071759.2, ENSRNOT00000081951.3
    Conserved Domains (1) summary
    cd09824
    Location:289702
    myeloperoxidase_like; Myeloperoxidases, eosinophil peroxidases, and lactoperoxidases
  2. XM_006247095.4XP_006247157.1  myeloperoxidase isoform X1

    See identical proteins and their annotated locations for XP_006247157.1

    UniProtKB/TrEMBL
    A0A0G2K1A2
    Conserved Domains (1) summary
    cd09824
    Location:289702
    myeloperoxidase_like; Myeloperoxidases, eosinophil peroxidases, and lactoperoxidases
  3. XM_063269097.1XP_063125167.1  myeloperoxidase isoform X1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001107036.1: Suppressed sequence

    Description
    NM_001107036.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.