U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Pilrb2l4 paired immunoglobin like type 2 receptor beta 2 like 4 [ Rattus norvegicus (Norway rat) ]

Gene ID: 304349, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
Pilrb2l4provided by RGD
Official Full Name
paired immunoglobin like type 2 receptor beta 2 like 4provided by RGD
Primary source
RGD:1559588
See related
EnsemblRapid:ENSRNOG00000049331 AllianceGenome:RGD:1559588
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Pilrb2l1; RGD1559588
Summary
Predicted to enable MHC class I protein binding activity. Predicted to be located in cell periphery and membrane. Orthologous to human PILRA (paired immunoglobin like type 2 receptor alpha). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Spleen (RPKM 95.8), Lung (RPKM 19.6) and 5 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Pilrb2l4 in Genome Data Viewer
Location:
12q11
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (22512512..22518410)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (17398844..17404810)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (19890546..19896468)

Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene STAG3 cohesin complex component Neighboring gene uncharacterized LOC134481272 Neighboring gene PVR related immunoglobulin domain containing Neighboring gene vomeronasal 2 receptor, 61 Neighboring gene igE-binding protein-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables MHC class I protein binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
paired immunoglobulin-like type 2 receptor beta; paired immunoglobulin-like type 2 receptor beta-2
Names
paired immunoglobin like type 2 receptor beta 2 like 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086030.1 Reference GRCr8

    Range
    22512512..22518410
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063271739.1 → XP_063127809.1  paired immunoglobulin-like type 2 receptor beta-2 isoform X6

  2. XM_063271737.1 → XP_063127807.1  paired immunoglobulin-like type 2 receptor beta isoform X3

    Related
    ENSRNOP00000061816.3, ENSRNOT00000064787.4

  3. XM_063271736.1 → XP_063127806.1  paired immunoglobulin-like type 2 receptor beta isoform X2

  4. XM_039089986.2 → XP_038945914.2  paired immunoglobulin-like type 2 receptor beta-2 isoform X7

  5. XM_039089985.2 → XP_038945913.1  paired immunoglobulin-like type 2 receptor beta isoform X1

    UniProtKB/TrEMBL
    F7FGP9
    Conserved Domains (2) summary
    cd00096
    Location:41 → 45
    Ig; Ig strand A [structural motif]
    cl11960
    Location:41 → 134
    Ig; Immunoglobulin domain

  6. XM_063271738.1 → XP_063127808.1  paired immunoglobulin-like type 2 receptor beta isoform X5

  7. XM_006249038.5 → XP_006249100.1  paired immunoglobulin-like type 2 receptor beta isoform X4

    See identical proteins and their annotated locations for XP_006249100.1

    UniProtKB/TrEMBL
    F7FGP9, M0R9X6
    Conserved Domains (1) summary
    cl11960
    Location:41 → 134
    Ig; Immunoglobulin domain

RNA

  1. XR_005491861.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools