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6430548M08Rikl RIKEN cDNA 6430548M08 gene like [ Rattus norvegicus (Norway rat) ]

Gene ID: 307907, updated on 10-Oct-2024

Summary

Official Symbol
6430548M08Riklprovided by RGD
Official Full Name
RIKEN cDNA 6430548M08 gene likeprovided by RGD
Primary source
RGD:1304884
See related
EnsemblRapid:ENSRNOG00000017431 AllianceGenome:RGD:1304884
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Kiaa0513; RGD1304884
Summary
Orthologous to human KIAA0513 (KIAA0513). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Brain (RPKM 336.3), Lung (RPKM 219.1) and 9 other tissues See more
Orthologs
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Genomic context

See 6430548M08Rikl in Genome Data Viewer
Location:
19q12
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 19 NC_086037.1 (65076626..65125185)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 19 NC_051354.1 (48168651..48216571)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 19 NC_005118.4 (52763352..53742184)

Chromosome 19 - NC_086037.1Genomic Context describing neighboring genes Neighboring gene cysteine-rich secretory protein LCCL domain containing 2 Neighboring gene zinc finger DHHC-type palmitoyltransferase 7 Neighboring gene CBY1 interacting BAR domain containing 2 Neighboring gene uncharacterized LOC102551361

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
uncharacterized protein KIAA0513 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001107436.2NP_001100906.1  uncharacterized protein KIAA0513 homolog

    See identical proteins and their annotated locations for NP_001100906.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000019
    UniProtKB/TrEMBL
    A0A8I5Y1M9, A6IZL7, D4A3C2
    Related
    ENSRNOP00000023478.5, ENSRNOT00000023478.7

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086037.1 Reference GRCr8

    Range
    65076626..65125185
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006255743.5XP_006255805.1  uncharacterized protein KIAA0513 homolog isoform X2

    See identical proteins and their annotated locations for XP_006255805.1

    UniProtKB/TrEMBL
    A0A8I5Y1M9, A6IZL8
    Related
    ENSRNOP00000077825.2, ENSRNOT00000099058.2
  2. XM_063278062.1XP_063134132.1  uncharacterized protein KIAA0513 homolog isoform X1

    UniProtKB/TrEMBL
    A6IZL7, D4A3C2
  3. XM_039097779.2XP_038953707.1  uncharacterized protein KIAA0513 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8I5Y1M9, A6IZL7, D4A3C2
  4. XM_063278063.1XP_063134133.1  uncharacterized protein KIAA0513 homolog isoform X1

    UniProtKB/TrEMBL
    A6IZL7, D4A3C2