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Glrx3 glutaredoxin 3 [ Mus musculus (house mouse) ]

Gene ID: 30926, updated on 2-Nov-2024

Summary

Official Symbol
Glrx3provided by MGI
Official Full Name
glutaredoxin 3provided by MGI
Primary source
MGI:MGI:1353653
See related
Ensembl:ENSMUSG00000031068 AllianceGenome:MGI:1353653
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PICOT; Txnl2
Summary
Predicted to enable identical protein binding activity and protein kinase C binding activity. Involved in negative regulation of cardiac muscle hypertrophy and regulation of the force of heart contraction. Located in Z disc. Is expressed in several structures, including brain; egg cylinder; genitourinary system; gut; and white fat. Orthologous to human GLRX3 (glutaredoxin 3). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in testis adult (RPKM 37.8), CNS E11.5 (RPKM 24.0) and 24 other tissues See more
Orthologs
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Genomic context

See Glrx3 in Genome Data Viewer
Location:
7 F4; 7 82.32 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (137039302..137071360)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (137437573..137469631)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 9430038I01 gene Neighboring gene STARR-positive B cell enhancer ABC_E2852 Neighboring gene STARR-seq mESC enhancer starr_20385 Neighboring gene nucleolin pseudogene Neighboring gene STARR-seq mESC enhancer starr_20386 Neighboring gene STARR-seq mESC enhancer starr_20387 Neighboring gene STARR-seq mESC enhancer starr_20388 Neighboring gene STARR-seq mESC enhancer starr_20391 Neighboring gene STARR-positive B cell enhancer ABC_E6613 Neighboring gene RIKEN cDNA 4930570E01 gene Neighboring gene STARR-seq mESC enhancer starr_20392 Neighboring gene STARR-seq mESC enhancer starr_20393 Neighboring gene predicted gene, 51411 Neighboring gene STARR-seq mESC enhancer starr_20395 Neighboring gene STARR-seq mESC enhancer starr_20396 Neighboring gene STARR-seq mESC enhancer starr_20397 Neighboring gene STARR-seq mESC enhancer starr_20398 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein kinase C binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in [2Fe-2S] cluster assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in [2Fe-2S] cluster assembly ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cell redox homeostasis ISO
Inferred from Sequence Orthology
more info
 
involved_in intracellular iron ion homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in intracellular iron ion homeostasis ISO
Inferred from Sequence Orthology
more info
 
involved_in iron-sulfur cluster assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of cardiac muscle hypertrophy IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein maturation by iron-sulfur cluster transfer ISO
Inferred from Sequence Orthology
more info
 
involved_in protein maturation by iron-sulfur cluster transfer ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of the force of heart contraction IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in Z disc IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell cortex IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
located_in dendrite ISO
Inferred from Sequence Orthology
more info
 
part_of iron-sulfur cluster assembly complex ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
glutaredoxin-3
Names
PKC-interacting cousin of thioredoxin
PKC-theta-interacting protein
PKCq-interacting protein
thioredoxin-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001348093.1NP_001335022.1  glutaredoxin-3 isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate exon in the 5' region and a downstream start codon, compared to variant 1. The resulting isoform (2) has a shorter N-terminus, compared to isoform 1.
    Source sequence(s)
    AC131791
    Conserved Domains (1) summary
    cd03028
    Location:93181
    GRX_PICOT_like; Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain ...
  2. NM_023140.5NP_075629.2  glutaredoxin-3 isoform 1

    See identical proteins and their annotated locations for NP_075629.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longer isoform (1).
    Source sequence(s)
    AC131791, AK017371, AK152446, BY771451
    Consensus CDS
    CCDS21948.1
    UniProtKB/Swiss-Prot
    Q5I0V8, Q9CQM9, Q9JLZ2
    UniProtKB/TrEMBL
    A0A1B0GS58
    Related
    ENSMUSP00000066621.7, ENSMUST00000064404.8
    Conserved Domains (2) summary
    cd02984
    Location:20115
    TRX_PICOT; TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT contains an ...
    cd03028
    Location:139227
    GRX_PICOT_like; Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    137039302..137071360
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)