U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Zfp775 zinc finger protein 775 [ Rattus norvegicus (Norway rat) ]

Gene ID: 312309, updated on 10-Jul-2024

Summary

Go to the top of the page Help
Official Symbol
Zfp775provided by RGD
Official Full Name
zinc finger protein 775provided by RGD
Primary source
RGD:1304910
See related
EnsemblRapid:ENSRNOG00000008362 AllianceGenome:RGD:1304910
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Znf775; RGD1304910
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZNF775 (zinc finger protein 775). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Kidney (RPKM 45.8), Heart (RPKM 43.3) and 9 other tissues See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Zfp775 in Genome Data Viewer
Location:
4q24
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (78887940..78906196)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (77557037..77575296)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (78240326..78258545)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 61 Neighboring gene retinoic acid receptor responder 2 Neighboring gene hypothetical LOC100363281 Neighboring gene replication initiator 1 Neighboring gene similar to Zinc finger and SCAN domain containing protein 2 (Zinc finger protein 29) Neighboring gene GTPase, IMAP family member 8

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
zinc finger protein 775

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001107859.2 → NP_001101329.1  zinc finger protein 775

    See identical proteins and their annotated locations for NP_001101329.1

    Status: PROVISIONAL

    Source sequence(s)
    JAXUCZ010000004
    UniProtKB/TrEMBL
    A0A8I6AHZ4, A6K0G5, D4A3N5
    Related
    ENSRNOP00000011041.3, ENSRNOT00000011041.6
    Conserved Domains (3) summary
    COG5048
    Location:307 → 355
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:450 → 470
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:295 → 320
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    78887940..78906196
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006236422.4 → XP_006236484.1  zinc finger protein 775 isoform X2

    See identical proteins and their annotated locations for XP_006236484.1

    UniProtKB/TrEMBL
    A0A8I6AHZ4, A6K0G5, D4A3N5
    Conserved Domains (3) summary
    COG5048
    Location:307 → 355
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:450 → 470
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:295 → 320
    zf-H2C2_2; Zinc-finger double domain

  2. XM_006236421.5 → XP_006236483.1  zinc finger protein 775 isoform X1

    See identical proteins and their annotated locations for XP_006236483.1

    UniProtKB/TrEMBL
    A0A8I6AAN4, A0A8I6AHZ4
    Conserved Domains (3) summary
    COG5048
    Location:352 → 400
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:495 → 515
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:340 → 365
    zf-H2C2_2; Zinc-finger double domain

  3. XM_063286028.1 → XP_063142098.1  zinc finger protein 775 isoform X2

    UniProtKB/TrEMBL
    A0A8I6AHZ4, A6K0G5, D4A3N5
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools
Miscellaneous