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Actl7b actin-like 7b [ Rattus norvegicus (Norway rat) ]

Gene ID: 313183, updated on 2-Nov-2024

Summary

Official Symbol
Actl7bprovided by RGD
Official Full Name
actin-like 7bprovided by RGD
Primary source
RGD:1305655
See related
EnsemblRapid:ENSRNOG00000016621 AllianceGenome:RGD:1305655
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be located in cytoskeleton. Predicted to be active in actin cytoskeleton; cytoplasm; and nucleus. Orthologous to human ACTL7B (actin like 7B). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See Actl7b in Genome Data Viewer
Location:
5q24
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (76240739..76242127, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (71445532..71446920, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (73492642..73494030, complement)

Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene SEC24 homolog C, COPII coat complex component, pseudogene 1 Neighboring gene uncharacterized LOC102553455 Neighboring gene actin-like 7a Neighboring gene elongator acetyltransferase complex subunit 1

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RGD

Component Evidence Code Pubs
is_active_in actin cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001025417.1NP_001020588.1  actin-like protein 7B

    See identical proteins and their annotated locations for NP_001020588.1

    Status: PROVISIONAL

    Source sequence(s)
    BC097412
    UniProtKB/Swiss-Prot
    Q4QR76
    UniProtKB/TrEMBL
    A6KDR2
    Related
    ENSRNOP00000022291.1, ENSRNOT00000022291.5
    Conserved Domains (1) summary
    smart00268
    Location:51417
    ACTIN; Actin

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086023.1 Reference GRCr8

    Range
    76240739..76242127 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)