U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

C7h22orf23 similar to human chromosome 22 open reading frame 23 [ Rattus norvegicus (Norway rat) ]

Gene ID: 315126, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
C7h22orf23provided by RGD
Official Full Name
similar to human chromosome 22 open reading frame 23provided by RGD
Primary source
RGD:1359634
See related
EnsemblRapid:ENSRNOG00000011170 AllianceGenome:RGD:1359634
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1359634
Summary
Orthologous to human C22orf23 (chromosome 22 open reading frame 23). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Testes (RPKM 215.1), Kidney (RPKM 75.8) and 9 other tissues See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See C7h22orf23 in Genome Data Viewer
Location:
7q34
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (112585341..112592938, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (110704894..110712485, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (120372874..120380465, complement)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene transfer RNA valine (anticodon AAC) 17 Neighboring gene eukaryotic translation initiation factor 3, subunit L Neighboring gene MICAL-like 1 Neighboring gene RNA polymerase II, I and III subunit F Neighboring gene SRY-box transcription factor 10

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Clone Names

  • MGC93972

General protein information

Go to the top of the page Help
Preferred Names
UPF0193 protein EVG1
Names
Mus EST J0827E04

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001007708.1 → NP_001007709.1  UPF0193 protein EVG1

    See identical proteins and their annotated locations for NP_001007709.1

    Status: PROVISIONAL

    Source sequence(s)
    BC079039
    UniProtKB/TrEMBL
    A0A8I6AAJ3, Q6AYH8
    Related
    ENSRNOP00000088958.1, ENSRNOT00000105348.2
    Conserved Domains (1) summary
    pfam05250
    Location:6 → 213
    UPF0193; Uncharacterized protein family (UPF0193)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    112585341..112592938 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006241992.4 → XP_006242054.1  UPF0193 protein EVG1 isoform X1

    See identical proteins and their annotated locations for XP_006242054.1

    UniProtKB/TrEMBL
    A0A8I6AAJ3, A6HSP8, F7FLU1
    Related
    ENSRNOP00000014878.4, ENSRNOT00000014878.7
    Conserved Domains (1) summary
    pfam05250
    Location:10 → 215
    UPF0193; uncharacterized protein family (UPF0193)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools