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PPIAP6 peptidylprolyl isomerase A pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 319128, updated on 10-Oct-2023

Summary

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Official Symbol
PPIAP6provided by HGNC
Official Full Name
peptidylprolyl isomerase A pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:20028
See related
AllianceGenome:HGNC:20028
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PPIP2; PPIAP12
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Genomic context

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See PPIAP6 in Genome Data Viewer
Location:
14q24.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (68421492..68422236, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (62628485..62629229, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (68888209..68888953, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene RAD51 paralog B Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8606 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr14:68810048-68810732 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5867 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:68830720-68831247 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:68831248-68831776 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8607 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:68838900-68839755 Neighboring gene VISTA enhancer hs1688 Neighboring gene uncharacterized LOC101927971 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:68863880-68864606 Neighboring gene ribosomal protein L7a pseudogene 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8608 Neighboring gene Sharpr-MPRA regulatory region 3354 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:68937409-68937942 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:68937943-68938476 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr14:68942861-68944060 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:68972115-68972678 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:68972679-68973242 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:68973243-68973806 Neighboring gene VISTA enhancer hs1616 Neighboring gene uncharacterized LOC124903334 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:68993143-68993664 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:68993665-68994185 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:69006151-69006711 Neighboring gene RAD51B intron CAGE-defined mid-level expression enhancer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:69017510-69018030 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:69018031-69018551 Neighboring gene uncharacterized LOC124903335

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the human cyclophilin gene and of related processed pseudogenes. Haendler B, et al. Eur J Biochem, 1990 Jul 5. PMID 2197089

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • peptidylprolyl isomerase (cyclophilin) pseudogene 2
  • peptidylprolyl isomerase A (cyclophilin A) pseudogene 12
  • peptidylprolyl isomerase A (cyclophilin A) pseudogene 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002506.4 

    Range
    101..845
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    68421492..68422236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    62628485..62629229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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