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Gm10336 predicted gene 10336 [ Mus musculus (house mouse) ]

Gene ID: 328186, updated on 17-Aug-2024

Summary

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Official Symbol
Gm10336provided by MGI
Official Full Name
predicted gene 10336provided by MGI
Primary source
MGI:MGI:3642355
See related
AllianceGenome:MGI:3642355
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
B330003H21
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Genomic context

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See Gm10336 in Genome Data Viewer
Location:
13 A1; 13 4.52 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (12197603..12201374, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (12182717..12186488, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene ryanodine receptor 2, cardiac Neighboring gene STARR-seq mESC enhancer starr_33653 Neighboring gene STARR-seq mESC enhancer starr_33654 Neighboring gene STARR-seq mESC enhancer starr_33656 Neighboring gene STARR-seq mESC enhancer starr_33658 Neighboring gene STARR-seq mESC enhancer starr_33659 Neighboring gene STARR-seq mESC enhancer starr_33660 Neighboring gene STARR-seq mESC enhancer starr_33661 Neighboring gene STARR-seq mESC enhancer starr_33662 Neighboring gene STARR-positive B cell enhancer mm9_chr13:12302569-12302869 Neighboring gene ribosomal protein S7 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E7201 Neighboring gene STARR-seq mESC enhancer starr_33665 Neighboring gene STARR-seq mESC enhancer starr_33666 Neighboring gene 5-methyltetrahydrofolate-homocysteine methyltransferase Neighboring gene actinin alpha 2 Neighboring gene predicted gene, 40667 Neighboring gene predicted gene 5445

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045170.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AC139941, AK046516

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    12197603..12201374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_183202.1: Suppressed sequence

    Description
    NM_183202.1: This RefSeq was permanently suppressed because it is now thought that this gene does encode a protein.
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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